Evidence map›Paper›PMID 15152344›Full record

ArticleAmerican journal of human genetics2004

Spinocerebellar ataxia type 8: molecular genetic comparisons and haplotype analysis of 37 families with ataxia.

Yoshio Ikeda, Joline C Dalton, Melinda L Moseley, Kathy L Gardner, Thomas D Bird, Tetsuo Ashizawa, William K Seltzer, Massimo Pandolfo, Aubrey Milunsky, Nicholas T Potter and 4 more

Abstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
  6. Article
  7. Chinese abnormal compound heterozygote spinocerebellar ataxia type 8: a case report.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2022
    Article
  8. Article
  9. Review
  10. Article
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  15. Article
  16. Article
  17. Review
  18. Repeat expansion diseases.Handbook of clinical neurology · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yoshio IkedaInstitute of Human Genetics and Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, 55455, USA.
Joline C Dalton
Melinda L Moseley
Kathy L Gardner
Thomas D Bird
Tetsuo Ashizawa
William K Seltzer
Massimo Pandolfo
Aubrey Milunsky
Nicholas T Potter
Mikio Shoji
John B Vincent
John W Day
Laura P W Ranum

Funding

Molecular Genetic Characterization of SCA8R37NS040389 · NINDS · UNIVERSITY OF FLORIDA · PI RANUM, LAURA P.W · 2015 to 2021
$4.5M
MOLECULAR GENETIC CHARACTERIZATION OF SCA8R01NS040389 · NINDS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI RANUM, LAURA P.W · 2000 to 2010
$3.8M
NINDS NIH HHS NS40389NINDS NIH HHS R01 NS040389NINDS NIH HHS R37 NS040389
6 · The paper itself

Abstract

We reported elsewhere that an untranslated CTG expansion causes the dominantly inherited neurodegenerative disorder spinocerebellar ataxia type 8 (SCA8). SCA8 shows a complex inheritance pattern with extremes of incomplete penetrance, in which often only one or two affected individuals are found in a given family. SCA8 expansions have also been found in control chromosomes, indicating that separate genetic or environmental factors increase disease penetrance among SCA8-expansion-carrying patients with ataxia. We describe the molecular genetic features and disease penetrance of 37 different families with SCA8 ataxia from the United States, Canada, Japan, and Mexico. Haplotype analysis using 17 STR markers spanning an approximately 1-Mb region was performed on the families with ataxia, on a group of expansion carriers in the general population, and on psychiatric patients, to clarify the genetic basis of the reduced penetrance and to investigate whether CTG expansions among different populations share a common ancestral background. Two major ancestrally related haplotypes (A and A') were found among white families with ataxia, normal controls, and patients with major psychosis, indicating a common ancestral origin of both pathogenic and nonpathogenic SCA8 expansions among whites. Two additional and distinct haplotypes were found among a group of Japanese families with ataxia (haplotype B) and a Mexican family with ataxia (haplotype C). Our finding that SCA8 expansions on three independently arising haplotypes are found among patients with ataxia and cosegregate with ataxia when multiple family members are affected further supports the direct role of the CTG expansion in disease pathogenesis.

Indexed as

Trinucleotide Repeat ExpansionCase-Control StudiesChromosome SegregationFemaleGenetic Predisposition to DiseaseGenetics, PopulationGenetic VariationHaplotypesHumansMaleMicrosatellite RepeatsMolecular BiologyNerve Tissue ProteinsPedigreePsychotic DisordersRNA, Long NoncodingATXN8OS gene product, humanNerve Tissue ProteinsRNA, Long NoncodingRNA, Untranslated

Identifiers

PMID15152344
PMCPMC1182005

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.