Evidence map›Paper›PMID 15148589›Full record

ArticleJournal of human genetics2004

Polymorphisms of the prion protein gene (PRNP) in a Korean population.

Byung-Hoon Jeong, Jae-Hwan Nam, Yun-Jung Lee, Kyung-Hee Lee, Myoung-Kuk Jang, Richard I Carp, Ho-Dong Lee, Young-Ran Ju, Sangmee Ahn Jo, Keun-Yong Park and 1 more

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Article in Journal of human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Prion Mutations in Republic of Republic of Korea, China, and Japan.International journal of molecular sciences · 2022
    Review
  9. Genetic aspects of human prion diseases.Frontiers in neurology · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Prion disease.Handbook of clinical neurology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Byung-Hoon JeongIlsong Institute of Life Science, Hallym University, Ilsong Building, 1605-4, Gwanyang-dong, Dongan-gu, Anyang, Kyounggi-do, 431-060, South Korea.
Jae-Hwan NamDepartment of Virology, Korea National Institute of Health, Eunpyung-gu, Seoul, 122-701, South Korea.
Yun-Jung LeeIlsong Institute of Life Science, Hallym University, Ilsong Building, 1605-4, Gwanyang-dong, Dongan-gu, Anyang, Kyounggi-do, 431-060, South Korea.
Kyung-Hee LeeIlsong Institute of Life Science, Hallym University, Ilsong Building, 1605-4, Gwanyang-dong, Dongan-gu, Anyang, Kyounggi-do, 431-060, South Korea.
Myoung-Kuk JangIlsong Institute of Life Science, Hallym University, Ilsong Building, 1605-4, Gwanyang-dong, Dongan-gu, Anyang, Kyounggi-do, 431-060, South Korea.
Richard I CarpNew York State Institute for Basic Research in Developmental Disabilities, Staten Island, NY, 10314, USA.
Ho-Dong LeeDepartment of Virology, Korea National Institute of Health, Eunpyung-gu, Seoul, 122-701, South Korea.
Young-Ran JuDepartment of Virology, Korea National Institute of Health, Eunpyung-gu, Seoul, 122-701, South Korea.
Sangmee Ahn JoDepartment of Virology, Korea National Institute of Health, Eunpyung-gu, Seoul, 122-701, South Korea.
Keun-Yong ParkDepartment of Virology, Korea National Institute of Health, Eunpyung-gu, Seoul, 122-701, South Korea.
Yong-Sun KimIlsong Institute of Life Science, Hallym University, Ilsong Building, 1605-4, Gwanyang-dong, Dongan-gu, Anyang, Kyounggi-do, 431-060, South Korea. yskim@hallym.ac.kr.
Hallym University · KRKorea National Institute of Health · KRNew York State Office for People With Developmental Disabilities · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human prion protein gene (PRNP) has been considered to be involved in the susceptibility of humans to prion diseases. Polymorphisms of methionine (Met)/valine (Val) at codon 129 and of glutamic acid (Glu)/lysine (Lys) at codon 219 are thought to play an important role in susceptibility to sporadic, iatrogenic and variant Creutzfeldt-Jakob disease (CJD). Although the genotype distribution of polymorphisms in PRNP open reading frame (ORF) has been reported in many European populations, among Asian groups, it has been reported only in the Japanese population. We examined the PRNP polymorphisms in 529 healthy Koreans. We observed that genotype frequencies at codon 129 was 94.33% Met/Met, 5.48% Met/Val, and 0.19% Val/Val with an allele frequency of 0.971:0.029 Met:Val, and that genotype frequencies at codon 219 was 92.06% Glu/Glu, 7.94% Glu/Lys, and 0% Lys/Lys with an allele frequency of 0.96:0.04 Glu:Lys. The frequencies of the Glu/Glu genotype ( chi(2)=10.075, P=0.0015) and of the Glu allele ( chi(2)=9.486, P=0.0021) at codon 219 were significantly higher in the Korean population than the Japanese population. In addition, the genotype frequency of heterozygotes (12.7%) at codons 129 or/and 219 was significantly lower in Koreans than in people from Great Britain ( chi(2)=89.52, P<0.0001). The deletion rate of one octarepeat (R2 deletion) was 0.38%, with 99.62% undeleted homozygotes and 0% deleted homozygote. To our knowledge, the R2 octarepeat deletion has never been found in people from countries other than Korea. The data of PRNP polymorphism at codon 219 suggest that Koreans may be more sensitive to sporadic CJD than the Japanese population.

Indexed as

Polymorphism, GeneticAllelesAmino Acid SequenceBase SequenceCodonGene FrequencyGenotypeGlutamic AcidHeterozygoteHomozygoteHumansKoreaLysineMethionineMolecular Sequence DataOpen Reading FramesCodonGlutamic AcidLysineMethioninePrionsValine

Identifiers

PMID15148589
OpenAlexW2159126515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.