Evidence map›Paper›PMID 15148408›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Inhibitor of kappaB kinase is required to activate a subset of interferon gamma-stimulated genes.

Nywana Sizemore, Anju Agarwal, Kingshuk Das, Natalia Lerner, Michael Sulak, Sandhya Rani, Richard Ransohoff, David Shultz, George R Stark

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. SNX8 mediates IFNγ-triggered noncanonical signaling pathway and host defense againstProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. A role for human brain pericytes in neuroinflammation.Journal of neuroinflammation · 2014
    Article
  9. The Role of F-Box Proteins during Viral Infection.International journal of molecular sciences · 2013
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Roles of IKK-beta, IRF1, and p65 in the activation of chemokine genes by interferon-gamma.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2009
    Article
  16. Unphosphorylated STAT1 prolongs the expression of interferon-induced immune regulatory genes.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  17. Article
  18. Bioinformatic analysis reveals cRel as a regulator of a subset of interferon-stimulated genes.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2008
    Article
  19. Article
  20. Antiviral and immunoregulatory activities of IFN-gamma depend on constitutively expressed IL-1alpha.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Nywana SizemoreDepartments of Cancer Biology, Neurosciences, and Molecular Biology, Cleveland Clinic Foundation, 9500 Euclid Avenue, Cleveland, OH 44195, USA.
Anju Agarwal
Kingshuk Das
Natalia Lerner
Michael Sulak
Sandhya Rani
Richard Ransohoff
David Shultz
George R Stark
Cleveland Clinic · US

Funding

TELOMERASE INACTIVATION BY RNASE L SIGNALS CELL DEATHP01CA062220 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, XIAOXIA, STARK, GEORGE ROBERT · 1994 to 2020
$35.6M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
Regulation of NFkB &Beta-catenin by pI3K/AKT/IKk pathR01CA100748 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI SIZEMORE, NYWANA · 2003 to 2006
$1.0M
NCI NIH HHS P01 CA062220NCI NIH HHS P01 CA 62220NCI NIH HHS R01 CA 100748NCI NIH HHS R01 CA100748NIGMS NIH HHS T32 GM007250
6 · The paper itself

Abstract

IkappaB kinase (IKK), discovered as the major activator of NF-kappaB, plays additional roles in signaling. By using mouse embryo fibroblasts (MEFs) lacking both the alpha and beta subunits of IKK, we find that these proteins are required for induction of a major subset of IFNgamma-stimulated genes and that this requirement is independent of NF-kappaB activation. Furthermore, there is no defect in IFNgamma-stimulated signal transducer and activator of transcription 1 (Stat1) activation or function in the IKKalpha/beta-null MEFs. Therefore, although activated Stat1 dimers are necessary for the activation of these genes in response to IFNgamma, they are not sufficient. These results reveal an important additional pathway for IFNgamma-stimulated gene expression in which an NF-kappaB-independent function of IKK is required.

Indexed as

AnimalsCells, CulturedDimerizationDNA-Binding ProteinsFibroblastsGene DeletionGene Expression RegulationI-kappa B KinaseInterferon-gammaMiceNF-kappa BProtein Serine-Threonine KinasesProtein Structure, QuaternaryRNA, MessengerSTAT1 Transcription FactorTrans-ActivatorsChuk protein, mouseDNA-Binding ProteinsI-kappa B KinaseIkbkb protein, mouseIkbke protein, mouseInterferon-gammaNF-kappa BProtein Serine-Threonine KinasesRNA, MessengerStat1 protein, mouseSTAT1 Transcription FactorTrans-Activators

Identifiers

PMID15148408
PMCPMC419545
OpenAlexW1965481431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.