Evidence map›Paper›PMID 15148359›Full record

ArticleNucleic acids research2004

Isolation and characterization of a novel DNA methyltransferase complex linking DNMT3B with components of the mitotic chromosome condensation machinery.

Theresa M Geiman, Umesh T Sankpal, Andrea K Robertson, Yue Chen, Manjari Mazumdar, Jason T Heale, John A Schmiesing, Wankee Kim, Kyoko Yokomori, Yingming Zhao and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 134 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Molecular Link between DNA Damage Response and Microtubule Dynamics.International journal of molecular sciences · 2022
    Review
  7. Mitotic chromosomes.Seminars in cell & developmental biology · 2021
    Review
  8. Article
  9. Deciphering DNA Methylation in HIV Infection.Frontiers in immunology · 2021
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Mutation ofGenes & development · 2017
    Article
  15. PARP1 Differentially Interacts with Promoter region ofJournal of genetic syndromes & gene therapy · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Theresa M GeimanEpigenetic Gene Regulation and Cancer Section, LRBGE/NCI/NIH, Bethesda, MD 20892, USA.
Umesh T Sankpal
Andrea K Robertson
Yue Chen
Manjari Mazumdar
Jason T Heale
John A Schmiesing
Wankee Kim
Kyoko Yokomori
Yingming Zhao
Keith D Robertson
National Institutes of Health · US

Funding

HUMAN SMC FAMILY PROTEINS IN CHROMOSOME DYNAMICSR01GM059150 · NIGMS · UNIVERSITY OF CALIFORNIA IRVINE · PI YOKOMORI, KYOKO · 1999 to 2003
$1.2M
IDENTIFICATION OF PROSTATE AND OVARIAN CANCER MARKERSU01CA085146 · NCI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI ZHAO, YINGMING · 1999 to 2003
$854k
NCI NIH HHS CA85146NCI NIH HHS U01 CA085146NIGMS NIH HHS GM59150NIGMS NIH HHS R01 GM059150
6 · The paper itself

Abstract

Proper patterns of genome-wide DNA methylation, mediated by DNA methyltransferases DNMT1, -3A and -3B, are essential for embryonic development and genomic stability in mammalian cells. The de novo DNA methyltransferase DNMT3B is of particular interest because it is frequently overexpressed in tumor cells and is mutated in immunodeficiency, centromere instability and facial anomalies (ICF) syndrome. In order to gain a better understanding of DNMT3B, in terms of the targeting of its methylation activity and its role in genome stability, we biochemically purified endogenous DNMT3B from HeLa cells. DNMT3B co-purifies and interacts, both in vivo and in vitro, with several components of the condensin complex (hCAP-C, hCAP-E and hCAP-G) and KIF4A. Condensin mediates genome-wide chromosome condensation at the onset of mitosis and is critical for proper segregation of sister chromatids. KIF4A is proposed to be a motor protein carrying DNA as cargo. DNMT3B also interacts with histone deacetylase 1 (HDAC1), the co-repressor SIN3A and the ATP-dependent chromatin remodeling enzyme hSNF2H. Further more, DNMT3B co-localizes with condensin and KIF4A on condensed chromosomes throughout mitosis. These studies therefore reveal the first direct link between the machineries regulating DNA methylation and mitotic chromosome condensation in mammalian cells.

Indexed as

Adenosine TriphosphatasesAnimalsChromosomal Proteins, Non-HistoneChromosomesChromosome SegregationDNADNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3BFluorescent Antibody TechniqueHeLa CellsHumansInterphaseKinesinsMacromolecular SubstancesAdenosine TriphosphatasesChromosomal Proteins, Non-Histonecondensin complexesDNADNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BKIF4A protein, humanKIF4B protein, humanKinesinsMacromolecular SubstancesMultiprotein ComplexesSMARCA5 protein, human

Identifiers

PMID15148359
PMCPMC419596
OpenAlexW2116824534

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.