Evidence map›Paper›PMID 15147351›Full record

ArticleClinical and experimental immunology2004

Differential gene expression in mononuclear phagocytes infected with pathogenic and non-pathogenic mycobacteria.

J A McGarvey, D Wagner, L E Bermudez

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Clinical and experimental immunology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. AProceedings of the National Academy of Sciences of the United States of America · 2025
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  9. The regulatory role of Mcl-1 in apoptosis of mouse peritoneal macrophage infected withInternational journal of clinical and experimental pathology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

J A McGarveyKuzell Institute for Arthritis and Infectious Diseases, California Pacific Medical Center Research Institute, San Francisco, CA, USA.
D Wagner
L E Bermudez
California Pacific Medical Center · USAgricultural Research Service · US

Funding

Genes Associated with Mycobacterium avium PathogenesisR01AI043199 · NIAID · OREGON STATE UNIVERSITY · PI BERMUDEZ, LUIZ EDUARDO · 1999 to 2014
$4.3M
Development of a MSP1-p42 Subunit Vaccine for MalariaR44AI043119 · NIAID · HAWAII BIOTECH, INC. · PI CLEMENTS, DAVID E. · 2001 to 2003
$1.3M
EXPRESSION OF MALARIA MSP-1 P42 C-TERMINAL FRAGMENTR43AI043119 · NIAID · HAWAII BIOTECH, INC. · PI CLEMENTS, DAVID E. · 1998 to 1998
–
NIAID NIH HHS AI-43119NIAID NIH HHS R01 AI043199
6 · The paper itself

Abstract

The pathogenic mycobacteria are an insidious group of bacterial pathogens that cause the deaths of millions of people every year. One of the reasons these pathogens are so successful is that they are able to invade and replicate within host macrophages, one of the first lines of defence against intruding pathogens. In contrast, non-pathogenic mycobacteria, such as Mycobacterium smegmatis are killed rapidly by macrophages. In order to understand better the series of events that allow pathogenic mycobacteria to survive and replicate within macrophages, while the non-pathogenic mycobacteria are killed rapidly, we inoculated the human monocytic cell line U937 with pathogenic (M. tuberculosis and M. avium) and non-pathogenic (M. smegmatis) mycobacteria and monitored the expression of over 3500 genes at 4, 12 and 24 h post-inoculation using a commercially available gene array system. We observed multiple differences in the gene expression patterns of monocytes infected with pathogenic and non-pathogenic mycobacteria including genes involved in cytokine, lymphokine and chemokine production, adhesion, apoptosis, signal transduction, transcription, protein cleavage, actin polymerization and growth. We also observed differences in gene expression profiles in monocytes infected with M. tuberculosis or M. avium, indicating that there are differences in the host pathogen interactions of mononuclear phagocytes infected with different pathogenic mycobacterial species. These results increase the understanding of the mechanisms used by pathogenic mycobacteria to cause disease, the host response to these organisms, and provide new insights for antimycobacterial intervention strategies.

Indexed as

Gene Expression RegulationHumansMacrophage ActivationMacrophagesMycobacteriumMycobacterium aviumMycobacterium InfectionsMycobacterium smegmatisMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionU937 Cells

Identifiers

PMID15147351
PMCPMC1809054
OpenAlexW2016816693

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.