Evidence map›Paper›PMID 15146073›Full record

ArticleRNA (New York, N.Y.)2004

Sequence motifs that distinguish ATP(CTP):tRNA nucleotidyl transferases from eubacterial poly(A) polymerases.

Georges Martin, Walter Keller

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in RNA (New York, N.Y.), 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. The First Poly(A) Polymerase fromInternational journal of molecular sciences · 2026
    Article
  3. Article
  4. Article
  5. Acquisition ofMicrobial genomics · 2021
    Article
  6. Adaptation of theInternational journal of molecular sciences · 2020
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. An inhibitory C-terminal region dictates the specificity of A-adding enzymes.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Evolution of tRNA nucleotidyltransferases: a small deletion generated CC-adding enzymes.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  18. Article
  19. Review
  20. RNA-specific ribonucleotidyl transferases.RNA (New York, N.Y.) · 2007
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Georges MartinDepartment of Cell Biology, Biozentrum, University of Basel, CH-4056 Basel, Switzerland.
Walter Keller
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATP(CTP):tRNA nucleotidyl transferases, tRNA maturing enzymes found in all organisms, and eubacterial poly(A) polymerases, enzymes involved in mRNA degradation, are so similar that until now their biochemical functions could not be distinguished by their amino acid sequence. BLAST searches and analysis with the program "Sequence Space" for the prediction of functional residues revealed sequence motifs which define these two protein families. One of the poly(A) polymerase defining motifs specifies a structure that we propose to function in binding the 3' terminus of the RNA substrate. Similar motifs are found in other homopolyribonucleotidyl transferases. Phylogenetic classification of nucleotidyl tranferases from sequenced genomes reveals that eubacterial poly(A) polymerases have evolved relatively recently and are found only in a small group of bacteria and surprisingly also in plants, where they may function in organelles.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsBacteriaCatalytic DomainHumansModels, MolecularMolecular Sequence DataPhylogenyPolynucleotide AdenylyltransferaseRNA NucleotidyltransferasesSequence AlignmentSequence Homology, Amino AcidPolynucleotide AdenylyltransferaseRNA NucleotidyltransferasestRNA nucleotidyltransferase

Identifiers

PMID15146073
PMCPMC1370581
OpenAlexW2098199226

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.