Evidence map›Paper›PMID 15143176›Full record

ArticleMolecular and cellular biology2004

Paired-type homeodomain transcription factors are imported into the nucleus by karyopherin 13.

Jonathan E Ploski, Monee K Shamsher, Aurelian Radu

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Article
  3. Nuclear TransporterCells · 2022
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Expression and subcellular distribution of imp13 are regulated in brain development.In vitro cellular & developmental biology. Animal · 2013
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jonathan E PloskiThe Carl C. Icahn Center for Gene Therapy and Molecular Medicine, Box 1496, The Mount Sinai School of Medicine, One Gustave L. Levy Place, New York, NY 10029, USA. Jonathan.Ploski@mssm.edu
Monee K Shamsher
Aurelian Radu

Funding

NUCLEOCYTOPLASMIC TRANSPORT--NEW FACTORS AND PATHWAYSR01GM057569 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI RADU, AURELIAN · 1998 to 2002
$577k
NIGMS NIH HHS R01 GM057569
6 · The paper itself

Abstract

We report that the paired homeodomain transcription factor Pax6 is imported into the nucleus by the Karyopherin beta family member Karyopherin 13 (Kap13). Pax6 was identified as a potential cargo for Kap13 by a yeast two-hybrid screen. Direct binding of Pax6 to Kap13 was subsequently confirmed by in vitro assays with recombinant proteins, and binding in vivo was shown by coimmunoprecipitation. Ran-dependent import of Pax6 by Kap13 was shown to occur by using a digitonin-permeabilized cells assay. Kap13 binds to Pax6 via a nuclear localization sequence (NLS), which is located within a segment of 80 amino acid residues that includes the homeodomain. Kap13 showed reduced binding to Pax6 when either region located at each end of the homeodomain (208 to 214 and 261 to 267) was deleted. The paired-type homeodomain transcription factor family includes more than 20 members. All members contain a region similar to the NLS found in Pax6 and are therefore likely to be imported by Kap13. We confirmed this hypothesis for Pax3 and Crx, which bind to and are imported by Kap13.

Indexed as

Amino AcidsAmino Acid Sequencebeta KaryopherinsCell NucleusEye ProteinsHeLa CellsHomeodomain ProteinsHumansMolecular Sequence DataPaired Box Transcription FactorsPAX6 Transcription FactorProtein Structure, TertiaryProtein TransportRepressor ProteinsSequence AlignmentTranscription FactorsAmino Acidsbeta KaryopherinsEye ProteinsHomeodomain ProteinsPaired Box Transcription FactorsPAX6 protein, humanPAX6 Transcription FactorRepressor ProteinsTranscription Factors

Identifiers

PMID15143176
PMCPMC416398

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.