Evidence map›Paper›PMID 15141293›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004

Use of Pi5(t) markers in marker-assisted selection to screen for cultivars with resistance to Magnaporthe grisea.

G Yi, S-K Lee, Y-K Hong, Y-C Cho, M-H Nam, S-C Kim, S-S Han, G-L Wang, T-R Hahn, P C Ronald and 1 more

Abstract readComparative Study
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The identification of Pi50(t), a new member of the rice blast resistance Pi2/Pi9 multigene family.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  9. Dissecting quantitative resistance against blast disease using heterogeneous inbred family lines in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  10. Article
  11. Article
  12. Article
  13. Development of a codominant CAPS marker linked to PRSV-P resistance in highland papaya.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

G YiNational Yeongnam Agricultural Experiment Station, Rural Development Administration, 1085, Neidong, Milyang, 627-803, Korea.
S-K Lee
Y-K Hong
Y-C Cho
M-H Nam
S-C Kim
S-S Han
G-L Wang
T-R Hahn
P C Ronald
J-S Jeon
Rural Development Administration · KRKyung Hee University · KRThe Ohio State University · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of the PCR markers tightly linked to genes that encode important agronomic traits is useful for marker-assisted selection (MAS). The rice Pi5(t) locus confers broad-spectrum resistance to Magnaporthe grisea, the causal agent of rice blast disease. It has been hypothesized that the Pi5(t) locus carries the same gene as that encoded by the Pi3(t) and Pii(t) loci. We developed three PCR-based dominant markers (JJ80-T3, JJ81-T3, and JJ113-T3) from three previously identified BIBAC clones-JJ80, JJ81, and JJ113-that are linked to the Pi5(t) locus. PCR analysis of 24 monogenic lines revealed that these markers are present only in lines that carry Pi5(t), Pi3(t), and Pii(t). PCR and DNA gel-blot analysis of candidate resistance lines using JJ80-T3, JJ81-T3, and JJ113-T3 indicated that Tetep is the likely donor of Pi5(t). Of the 184 rice varieties tested, 34 carried the JJ80-T3-, JJ81-T3-, and JJ113-T3-specific bands. Disease evaluation of those 34 varieties revealed that all conferred resistance to PO6-6. The genomic structure of three of these resistant varieties (i.e., IR72, Taebaeg, Jahyangdo) is most similar to that of Pi5(t). Our results demonstrate the usefulness of the JJ80-T3, JJ81-T3, and JJ113-T3 markers for MAS for M. grisea resistance.

Indexed as

MagnaportheSelection, GeneticBreedingDNA PrimersGenetic MarkersImmunity, InnateNucleotide MappingOryzaPlant DiseasesPolymerase Chain ReactionSpecies SpecificityDNA PrimersGenetic Markers

Identifiers

PMID15141293
OpenAlexW2145560943

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.