Evidence map›Paper›PMID 15135062›Full record

ArticleFEBS letters2004

Identification of a novel protein 3a from severe acute respiratory syndrome coronavirus.

Chia-Jung Yu, Yee-Chun Chen, Cheng-Hsiang Hsiao, Tse-Chun Kuo, Shin C Chang, Chun-Yi Lu, Wen-Chin Wei, Chia-Huei Lee, Li-Min Huang, Ming-Fu Chang and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. International journal of molecular sciences · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Chia-Jung YuDepartment of Medical Research, National Taiwan University Hospital, 7 Chung Shan South Road, Taipei 100, Taiwan.
Yee-Chun Chen
Cheng-Hsiang Hsiao
Tse-Chun Kuo
Shin C Chang
Chun-Yi Lu
Wen-Chin Wei
Chia-Huei Lee
Li-Min Huang
Ming-Fu Chang
Hong-Nerng Ho
Fang-Jen S Lee
National Taiwan University · TWNational Taiwan University Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The open reading frame 3 of the severe acute respiratory syndrome coronavirus (SARS-CoV) genome encodes a predicted protein 3a, consisting of 274 amino acids, that lacks any significant similarities to any known protein. We generated specific antibodies against SARS protein 3a by using a synthetic peptide (P2) corresponding to amino acids 261-274 of the putative protein. Anti-P2 antibodies and the sera from SARS patients could specifically detect the recombinant SARS protein 3a expressed in Escherichia coli and in Vero E6 cells. Expression of SARS protein 3a was detected at 8-12 h after infection and reached a higher level after approximately 24 h in SARS-CoV-infected Vero E6 cells. Protein 3a was also detected in the alveolar lining pneumocytes and some intra-alveolar cells of a SARS-CoV-infected patient's lung specimen. Recombinant protein 3a expressed in Vero E6 cells and protein 3a in the SARS-CoV-infected cells was distributed over the cytoplasm in a fine punctate pattern with partly concentrated staining in the Golgi apparatus. Our study demonstrates that SARS-CoV indeed expresses a novel protein 3a, which is present only in SARS-CoV and not in other known CoVs.

Indexed as

AnimalsAntibodiesChlorocebus aethiopsCloning, MolecularCytochrome b GroupCytoplasmDNA, ComplementaryElectrophoresis, Polyacrylamide GelEscherichia coliGolgi ApparatusHumansImmunohistochemistryLungMicroscopy, FluorescenceNucleocapsidOpen Reading Frames3a protein, SARS-CoVAntibodiescytochrome b561Cytochrome b GroupDNA, ComplementaryPeptidesRecombinant ProteinsViral Envelope ProteinsViral ProteinsViroporin Proteins

Identifiers

PMID15135062
PMCPMC7126674
OpenAlexW2156411549

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.