ArticleJournal of bacteriology2004
Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655.
Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
15 citing papers in PubMed.
- Comprehensive Spatial Analysis of the Borrelia burgdorferi Lipoproteome Reveals a Compartmentalization Bias toward the Bacterial Surface.Journal of bacteriology · 2017Article
- The membrane: transertion as an organizing principle in membrane heterogeneity.Frontiers in microbiology · 2015Review
- Secretion of bacterial lipoproteins: through the cytoplasmic membrane, the periplasm and beyond.Biochimica et biophysica acta · 2014Review
- Transcriptional responses of uropathogenic Escherichia coli to increased environmental osmolality caused by salt or urea.Infection and immunity · 2013Article
- Microbial amyloids induce interleukin 17A (IL-17A) and IL-22 responses via Toll-like receptor 2 activation in the intestinal mucosa.Infection and immunity · 2012Article
- The double life of a bacterial lipoprotein.Molecular microbiology · 2011Article
- Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies.PloS one · 2011Article
- Phosphate starvation triggers production and secretion of an extracellular lipoprotein in Caulobacter crescentus.PloS one · 2010Article
- Toll-like receptors 1 and 2 cooperatively mediate immune responses to curli, a common amyloid from enterobacterial biofilms.Cellular microbiology · 2010Article
- alpha-Macroglobulins are present in some gram-negative bacteria: characterization of the alpha2-macroglobulin from Escherichia coli.The Journal of biological chemistry · 2008Article
- Large-scale preparation of the homogeneous LolA lipoprotein complex and efficient in vitro transfer of lipoproteins to the outer membrane in a LolB-dependent manner.Protein science : a publication of the Protein Society · 2007Article
- Insights into the biology of Escherichia coli through structural proteomics.Journal of structural and functional genomics · 2007Review
- Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles.PLoS biology · 2007Article
- A novel data mining method to identify assay-specific signatures in functional genomic studies.BMC bioinformatics · 2006Article
- Role of the extracytoplasmic function protein family sigma factor RpoE in metal resistance of Escherichia coli.Journal of bacteriology · 2005Article
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
To gain insight into the cell envelope of Escherichia coli grown under aerobic and anaerobic conditions, lipoproteins were examined by using functional genomics. The mRNA expression levels of each of these genes under three growth conditions--aerobic, anaerobic, and anaerobic with nitrate--were examined by using both Affymetrix GeneChip E. coli antisense genome arrays and real-time PCR (RT-PCR). Many genes showed significant changes in expression level. The RT-PCR results were in very good agreement with the microarray data. The results of this study represent the first insights into the possible roles of unknown lipoprotein genes and broaden our understanding of the composition of the cell envelope under different environmental conditions. Additionally, these data serve as a test set for the refinement of high-throughput bioinformatic and global gene expression methods.
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Registered trials
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