ArticleGenetics2004
Integrating genetic linkage maps with pachytene chromosome structure in maize.
Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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Who cites it
33 citing papers in PubMed, 70 citations in OpenAlex.
- Isolation of Meiocytes and Cytological Analyses of Male Meiotic Chromosomes in Soybean, Lettuce, and Maize.Methods in molecular biology (Clifton, N.J.) · 2023Article
- The megabase-scale crossover landscape is largely independent of sequence divergence.Nature communications · 2022Article
- Fourth Report on Chicken Genes and Chromosomes 2022.Cytogenetic and genome research · 2022Review
- Anchoring a genetic map of an interspecific backcross two family to the genome builds of Elaeis.Journal of genetics · 2021Article
- Genetic differentiation and intrinsic genomic features explain variation in recombination hotspots among cocoa tree populations.BMC genomics · 2020Article
- A Molecular Cytogenetic Map of Scallop (Patinopecten yessoensis).Marine biotechnology (New York, N.Y.) · 2019Article
- Forcing the shift of the crossover site to proximal regions in wheat chromosomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Sex-specific recombination maps for individual macrochromosomes in the Japanese quail (Coturnix japonica).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2015Article
- Karyotype variability in tropical maize sister inbred lines and hybrids compared with KYS standard line.Frontiers in plant science · 2014Article
- Identifying crossover-rich regions and their effect on meiotic homologous interactions by partitioning chromosome arms of wheat and rye.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2013Article
- Development of pachytene FISH maps for six maize chromosomes and their integration with other maize maps for insights into genome structure variation.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012Article
- Fine-scale population recombination rates, hotspots, and correlates of recombination in the Medicago truncatula genome.Genome biology and evolution · 2012Article
- Dynamics of rye chromosome 1R regions with high or low crossover frequency in homology search and synapsis development.PloS one · 2012Article
- A high resolution genetic map anchoring scaffolds of the sequenced watermelon genome.PloS one · 2012Article
- Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa.BMC genomics · 2011Article
- The selection and use of sorghum (Sorghum propinquum) bacterial artificial chromosomes as cytogenetic FISH probes for maize (Zea mays L.).Journal of biomedicine & biotechnology · 2011Article
- Applying small-scale DNA signatures as an aid in assembling soybean chromosome sequences.Advances in bioinformatics · 2010Article
- A single molecule scaffold for the maize genome.PLoS genetics · 2009Article
- Assignment of genetic linkage maps to diploid Solanum tuberosum pachytene chromosomes by BAC-FISH technology.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2009Article
- Integrated cytogenetic map of mitotic metaphase chromosome 9 of maize: resolution, sensitivity, and banding paint development.Chromosoma · 2008Article
Corrections and comments
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genetic linkage maps reveal the order of markers based on the frequency of recombination between markers during meiosis. Because the rate of recombination varies along chromosomes, it has been difficult to relate linkage maps to chromosome structure. Here we use cytological maps of crossing over based on recombination nodules (RNs) to predict the physical position of genetic markers on each of the 10 chromosomes of maize. This is possible because (1). all 10 maize chromosomes can be individually identified from spreads of synaptonemal complexes, (2). each RN corresponds to one crossover, and (3). the frequency of RNs on defined chromosomal segments can be converted to centimorgan values. We tested our predictions for chromosome 9 using seven genetically mapped, single-copy markers that were independently mapped on pachytene chromosomes using in situ hybridization. The correlation between predicted and observed locations was very strong (r(2) = 0.996), indicating a virtual 1:1 correspondence. Thus, this new, high-resolution, cytogenetic map enables one to predict the chromosomal location of any genetically mapped marker in maize with a high degree of accuracy. This novel approach can be applied to other organisms as well.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.