Evidence map›Paper›PMID 15121905›Full record

ArticleNucleic acids research2004

A DNA replication-related element downstream from the initiation site of Drosophila selenophosphate synthetase 2 gene is essential for its transcription.

Jing Shun Jin, Seunghee Baek, Hyesin Lee, Mi Young Oh, Yong Eui Koo, Myoung Sup Shim, So Yeon Kwon, Iksoo Jeon, So Young Park, Kwanghee Baek and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Jing Shun JinSchool of Biological Sciences and Institute of Molecular Biology and Genetics, Seoul National University, Korea.
Seunghee Baek
Hyesin Lee
Mi Young Oh
Yong Eui Koo
Myoung Sup Shim
So Yeon Kwon
Iksoo Jeon
So Young Park
Kwanghee Baek
Mi Ae Yoo
Dolph Lee Hatfield
Byeong Jae Lee
Seoul National University · KR

Funding

Role of Selenium in Development and HealthZIABC005317 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HATFIELD, DOLPH · 2009 to 2014
$2.7M
ROLE OF SELENIUM IN PREVENTING CANCER, HEART DISEASE AND DELAYING AGING PROCESSZ01BC005317 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HATFIELD, DOLPH · 1996 to 2008
$1.5M
6 · The paper itself

Abstract

Selenophosphate synthetase catalyzes the synthesis of selenophosphate which is a selenium donor for Sec biosynthesis. In Drosophila melanogaster, there are two types of selenophosphate synthetases designated dSPS1 and dSPS2, where dSPS2 is a selenoprotein. The mechanism of gene expression of dSPS2 as well as other selenoproteins in Drosophila has not been elucidated. Herein, we report an essential regulator system that regulates the transcription of the dSPS2 gene (dsps2). Through deletion/substitution mutagenesis, the downstream DNA replication-related element (DRE) located at +71 has been identified as an essential element for dsps2 promoter activity. Furthermore, double-stranded RNA interference (dsRNAi) experiments were performed to ablate transcription factors such as TBP, TRF1, TRF2 and DREF in Schneider cells. The dsRNAi experiments showed that dsps2 promoter activities in DREF- and TRF2-depleted cells were significantly decreased by 90% and 50%, respectively. However, the depletion of TBP or TRF1 did not affect the expression level of dsps2 even though there is a putative TATA box at -20. These results strongly suggest that the DRE/DREF system controls the basal level of transcription of dsps2 by interacting with TRF2.

Indexed as

Response ElementsTranscriptional Activation5' Flanking RegionAnimalsBase SequenceBinding SitesCloning, MolecularDNA ReplicationDrosophilaDrosophila ProteinsEnzyme InductionGenes, InsectMolecular Sequence DataPhosphotransferasesPromoter Regions, GeneticRNA InterferenceDref protein, DrosophilaDrosophila ProteinsPhosphotransferasesselenophosphate synthetasesps1 protein, DrosophilaSps2 protein, DrosophilaTranscription Factors

Identifiers

PMID15121905
PMCPMC419457
OpenAlexW2135723410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.