Evidence map›Paper›PMID 15113926›Full record

ArticleJournal of virology2004

Impact of mutations in the coreceptor binding site on human immunodeficiency virus type 1 fusion, infection, and entry inhibitor sensitivity.

Jacqueline D Reeves, John L Miamidian, Mark J Biscone, Fang-Hua Lee, Navid Ahmad, Theodore C Pierson, Robert W Doms

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 113 citations in OpenAlex.

  1. Trial
  2. Review
  3. Review
  4. 2022 update of the drug resistance mutations in HIV-1.Topics in antiviral medicine · 2022
    Article
  5. Review
  6. 2019 update of the drug resistance mutations in HIV-1.Topics in antiviral medicine · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. HIV-1 antiretroviral drug therapy.Cold Spring Harbor perspectives in medicine · 2012
    Review
  18. Article
  19. 2011 update of the drug resistance mutations in HIV-1.Topics in antiviral medicine · 2011
    Review
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jacqueline D ReevesDepartment of Microbiology, University of Pennsylvania, 225 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA. jreeves@mail.med.upenn.edu
John L Miamidian
Mark J Biscone
Fang-Hua Lee
Navid Ahmad
Theodore C Pierson
Robert W Doms
University of Pennsylvania · US

Funding

PHS HHS R01 40880
6 · The paper itself

Abstract

An increasingly large number of antiviral agents that prevent entry of human immunodeficiency virus (HIV) into cells are in preclinical and clinical development. The envelope (Env) protein of HIV is the major viral determinant that affects sensitivity to these compounds. To understand how changes in Env can impact entry inhibitor sensitivity, we introduced six mutations into the conserved coreceptor binding site of the R5 HIV-1 strain YU-2 and measured the effect of these changes on CD4 and coreceptor binding, membrane fusion levels and rates, virus infection, and sensitivity to the fusion inhibitors enfuvirtide (T-20) and T-1249, the CCR5 inhibitor TAK-779, and an antibody to CD4. The mutations had little effect on CD4 binding but reduced CCR5 binding to various extents. In general, reductions in coreceptor binding efficiency resulted in slower fusion kinetics and increased sensitivity to TAK-779 and enfuvirtide. In addition, low CCR5 binding usually reduced overall fusion and infection levels. However, one mutation adjacent to the bridging sheet beta21 strand, P438A, had little effect on fusion activity, fusion rate, infectivity, or sensitivity to enfuvirtide or T-1249 despite causing a marked reduction in CCR5 binding and a significant increase in TAK-779 sensitivity. Thus, our findings indicate that changes in the coreceptor binding site of Env can modulate its fusion activity, infectivity, and entry inhibitor sensitivity by multiple mechanisms and suggest that reductions in coreceptor binding do not always result in prolonged fusion kinetics and increased sensitivity to enfuvirtide.

Indexed as

Membrane FusionAmidesAnti-HIV AgentsBinding SitesCD4 AntigensCell LineEnfuvirtideHIV-1HIV Envelope Protein gp120HIV Envelope Protein gp41HumansMutationPeptide FragmentsQuaternary Ammonium CompoundsReceptors, CCR5Structure-Activity RelationshipAmidesAnti-HIV AgentsCD4 AntigensEnfuvirtideHIV Envelope Protein gp120HIV Envelope Protein gp41Peptide FragmentsQuaternary Ammonium CompoundsReceptors, CCR5TAK 779

Identifiers

PMID15113926
PMCPMC400359
OpenAlexW2014396315

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.