Evidence map›Paper›PMID 15108275›Full record

ReviewHuman mutation2004

Single-molecule analysis for molecular haplotyping.

Pui-Yan Kwok, Ming Xiao

Open access · greenAbstract readReview
In one paragraph

Review in Human mutation, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Haplotype thinking in lung disease.Proceedings of the American Thoracic Society · 2007
    Review
  7. Long-range multilocus haplotype phasing of the MHC.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Pui-Yan KwokDepartment of Dermatology, University of California, San Francisco 94143-0130, USA. kwok@itsa.ucsf.edu
Ming Xiao
University of California, San Francisco · US

Funding

TECHNOLOGIES FOR DIALLELIC MARKER DISCOVERY AND TESTINGR01HG001720 · NHGRI · WASHINGTON UNIVERSITY · PI KWOK, PUI-YAN · 1997 to 2007
$9.6M
NHGRI NIH HHS R01 HG001720
6 · The paper itself

Abstract

In the genome era, there is great hope that genetic approaches such as linkage equilibrium mapping can be used to study common human disorders using a case-control population association study design. Ideally, the parental chromosomes are marked so that chromosomal regions in the form of haplotypes are compared in these studies to increase the power of association. Determining the haplotypes in a diploid individual is a major technical challenge in genetic studies of complex traits. A molecular approach to haplotyping is therefore highly desirable. Recent advances in DNA preparation, separation, labeling, and image analysis provide hope that a strategy of using a three-dye system coupled with DNA distance measurements between alleles will yield haplotype information of sufficiently high quality for genetic studies. In this work, we present the outline of the major challenges one must meet in developing a robust strategy for SNP detection and molecular haplotyping using single molecule analysis.

Indexed as

HaplotypesPolymorphism, Single NucleotideAllelesDNA Mutational AnalysisFluorescent DyesHumansPolymerase Chain ReactionFluorescent Dyes

Identifiers

PMID15108275
PMCPMC1820841
OpenAlexW2050633988

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.