Evidence map›Paper›PMID 15107494›Full record

ArticleNucleic acids research2004

Transcription factor cCP2 controls gene expression in chicken embryonic stem cells.

Hervé Acloque, Anne Mey, Anne Marie Birot, Henri Gruffat, Bertrand Pain, Jacques Samarut

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hervé AcloqueLaboratoire de Biologie Moléculaire de la Cellule, CNRS-INRA UMR5161, Ecole Normale Supérieure de Lyon, IFR128 BioSciences Lyon-Gerland, 46 Allée d'Italie, 69364 Lyon Cedex 07, France.
Anne Mey
Anne Marie Birot
Henri Gruffat
Bertrand Pain
Jacques Samarut
École Normale Supérieure de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

cENS-1/cERNI genes have been shown to be expressed very early during chicken embryonic development and as well as in pluripotent chicken embryonic stem (CES) cells. We have previously identified a promoter region, which is specifically active in CES cells compared to differentiated cells. In order to understand the molecular mechanisms which regulate the cENS-1/cERNI promoter, we analyzed the cis-acting elements of this promoter in CES and differentiated cells. We identified a short sequence, named the B region, 5'-CAAG TCCAGG CAAG-3', that exhibits a strong enhancer activity in CES and differentiated cells. Mutation of the B region in the whole cENS-1 promoter strongly decreases the promoter activity in CES cells, suggesting that this region is essential for activating the promoter. The B region is similar to the previously described response element for the transcription factor CP2 and we show by supershift experiments that a protein complex containing CP2 is bound to this B response element. All these results identify a nuclear factor belonging to the CP2 transcription factor family that is crucial for the activation of the cENS-1/cERNI promoter. The pattern of expression of cCP2 in early chicken embryo before gastrulation is very similar to that of cENS-1/cERNI which strongly suggests that cCP2 also plays an essential role in gene expression early in embryonic development.

Indexed as

Chick EmbryoGene Expression Regulation, DevelopmentalAnimalsAvian ProteinsBase SequenceBinding SitesCell LineChickensDNA-Binding ProteinsDNA MethylationFetal ProteinsGene Expression ProfilingMolecular Sequence DataPromoter Regions, GeneticResponse ElementsRNA-Binding ProteinsAvian ProteinsDNA-Binding ProteinsENS-1 protein, chickenFetal ProteinsRNA-Binding ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID15107494
PMCPMC407827
OpenAlexW1991283370

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.