Evidence map›Paper›PMID 15104537›Full record

ArticleThe Biochemical journal2004

Modular organization of a Cdc6-like protein from the crenarchaeon Sulfolobus solfataricus.

Mariarita De Felice, Luca Esposito, Biagio Pucci, Mariarosaria De Falco, Giuseppe Manco, Mosè Rossi, Francesca M Pisani

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Archaeal eukaryote-like Orc1/Cdc6 initiators physically interact with DNA polymerase B1 and regulate its functions.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  6. Article
  7. The architecture of the DNA replication origin recognition complex in Saccharomyces cerevisiae.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mariarita De FeliceIstituto di Biochimica delle Proteine, Consiglio Nazionale delle Ricerche, Via P. Castellino 111, 80131-Napoli, Italy.
Luca Esposito
Biagio Pucci
Mariarosaria De Falco
Giuseppe Manco
Mosè Rossi
Francesca M Pisani
National Research Council · ITInstitute of Protein Biochemistry · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present paper, we report that a Cdc6 (cell-division control)-like factor from the hyperthermophilic crenarchaeon Sulfolobus solfataricus (referred to as SsoCdc6-2) has a modular organization of its biological functions. A reliable model of the SsoCdc6-2 three-dimensional structure was built up, based on the significant sequence identity with the Pyrobaculum aerophylum Cdc6 (PaeCdc6), whose crystallographic structure is known. This allowed us to design two truncated forms of SsoCdc6-2: the DeltaC (residues 1-297, molecular mass 35 kDa) and the DeltaN (residues 298-400, molecular mass 11 kDa) proteins. The DeltaC protein contains the nucleotide-binding Rossmann fold and the Sensor-2 motif (Domains I and II in the PaeCdc6 structure), and retains the ability to bind and hydrolyse ATP. On the other hand, the DeltaN protein contains the C-terminal WH (winged helix)-fold (Domain III), and is able to bind DNA molecules and to inhibit the DNA helicase activity of the SsoMCM (mini-chromosome maintenance) complex, although with lesser efficiency with respect to the full-sized SsoCdc6-2. These results provide direct biochemical evidence that the Cdc6 WH-domain is responsible for DNA-binding and inhibition of MCM DNA helicase activity.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAlternative SplicingAmino Acid SequenceArchaeal ProteinsCell Cycle ProteinsChromosomes, ArchaealDNADNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedModels, MolecularMolecular Sequence DataPhosphorylationProtein BindingRecombinant ProteinsAdenosine TriphosphatasesAdenosine TriphosphateArchaeal ProteinsCDC6 protein, S cerevisiaeCell Cycle ProteinsDNADNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedRecombinant ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID15104537
PMCPMC1133873
OpenAlexW2078771725

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.