Evidence map›Paper›PMID 15094798›Full record

ArticlePLoS biology2004

Mimotopes for alloreactive and conventional T cells in a peptide-MHC display library.

Frances Crawford, Eric Huseby, Janice White, Philippa Marrack, John W Kappler

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 74 citations in OpenAlex.

  1. Design of solubly expressed miniaturized SMART MHCs.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Aire mediates tolerance to insulin through thymic trimming of high-affinity T cell clones.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Review
  5. T cell antigen discovery.Nature methods · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Stress-testing the relationship between T cell receptor/peptide-MHC affinity and cross-reactivity using peptide velcro.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  11. N-terminal additions to the WE14 peptide of chromogranin A create strong autoantigen agonists in type 1 diabetes.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
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  18. T-cell receptor (TCR) interaction with peptides that mimic nickel offers insight into nickel contact allergy.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Frances CrawfordHoward Hughes Medical Institute, Integrated Department of Immunology, National Jewish Medical and Research Center, Denver, Colorado, USA.
Eric Huseby
Janice White
Philippa Marrack
John W Kappler
Howard Hughes Medical Institute · USUniversity of Colorado Denver · USUniversity of Colorado Health · US

Funding

THE REGULATION OF V ALPHA 7 EXPRESSING T CELLSP01AI022295 · NIAID · NATIONAL JEWISH HEALTH · PI REFAELI, YOSEF · 1985 to 2011
$11.7M
CHARACTERISTICS OF T CELL RECEPTORSR01AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 1985 to 2022
$7.3M
REGULATORY MECHANISMS IN THE IMMUNE SYSTEMR01AI017134 · NIAID · NATIONAL JEWISH HEALTH · PI KAPPLER, JOHN W · 1985 to 2006
$1.6M
CHARACTERISTICS OF T-CELL RECEPTORSR37AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 1992 to 2001
$522k
Characteristics of T Cell ReceptorsR56AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 2012 to 2012
$410k
Regulatory Mechanisms in the Immune SystemR56AI017134 · NIAID · NATIONAL JEWISH HEALTH · PI KAPPLER, JOHN W · 2007 to 2007
$321k
REGULATORY MECHANISMS IN THE IMMUNE SYSTEMR37AI017134 · NIAID · NATIONAL JEWISH HEALTH · PI KAPPLER, JOHN W · 1987 to 1996
–
NIAID NIH HHS AI-17134NIAID NIH HHS AI-18785NIAID NIH HHS AI-22295NIAID NIH HHS P01 AI022295NIAID NIH HHS R01 AI017134NIAID NIH HHS R01 AI018785NIAID NIH HHS R37 AI018785NIAID NIH HHS R56 AI017134NIAID NIH HHS R56 AI018785
6 · The paper itself

Abstract

The use of peptide libraries for the identification and characterization of T cell antigen peptide epitopes and mimotopes has been hampered by the need to form complexes between the peptides and an appropriate MHC molecule in order to construct a complete T cell ligand. We have developed a baculovirus-based peptide library method in which the sequence encoding the peptide is embedded within the genes for the MHC molecule in the viral DNA, such that insect cells infected with virus encoding a library of different peptides each displays a unique peptide-MHC complex on its surface. We have fished in such a library with two different fluorescent soluble T cell receptors (TCRs), one highly peptide specific and the other broadly allo-MHC specific and hypothesized to be much less focused on the peptide portion of the ligand. A single peptide sequence was selected by the former alphabetaTCR that, not unexpectedly, was highly related to the immunizing peptide. As hypothesized, the other alphabetaTCR selected a large family of peptides, related only by a similarity to the immunizing peptide at the p5 position. These findings have implications for the relative importance of peptide and MHC in TCR ligand recognition. This display method has broad applications in T cell epitope identification and manipulation and should be useful in general in studying interactions between complex proteins.

Indexed as

Major Histocompatibility ComplexAmino Acid SequenceAnimalsAntibodies, MonoclonalB7-1 AntigenBaculoviridaeCell LineDNA, ViralEpitopesEpitopes, T-LymphocyteFlow CytometryGene LibraryHistocompatibility Antigens Class IHybridomasInsectaIntercellular Adhesion Molecule-1Antibodies, MonoclonalB7-1 AntigenDNA, ViralEpitopesEpitopes, T-LymphocyteHistocompatibility Antigens Class IIntercellular Adhesion Molecule-1Interleukin-2LigandsOligonucleotidesPeptide LibraryPeptidesReceptors, Antigen, T-Cell

Identifiers

PMID15094798
PMCPMC387264
OpenAlexW2010309262

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.