Evidence map›Paper›PMID 15086960›Full record

ArticleBMC plant biology2004

Synthesis of chlorophyll b: localization of chlorophyllide a oxygenase and discovery of a stable radical in the catalytic subunit.

Laura L Eggink, Russell LoBrutto, Daniel C Brune, Judy Brusslan, Akihiro Yamasato, Ayumi Tanaka, J Kenneth Hoober

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC plant biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. ChlorophyllPlants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. A Protochlorophyllide (Pchlide)Frontiers in plant science · 2019
    Article
  12. Article
  13. Fe deficiency induced changes in rice (Oryza sativa L.) thylakoids.Environmental science and pollution research international · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Recent advances in chlorophyll biosynthesis.Photosynthesis research · 2006
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Laura L EgginkSchool of Life Sciences, Arizona State University, Tempe, Arizona 85287-4501, USA. leggink@asu.edu
Russell LoBrutto
Daniel C Brune
Judy Brusslan
Akihiro Yamasato
Ayumi Tanaka
J Kenneth Hoober
Arizona State University · USHokkaido University · JPCalifornia State University, Long Beach · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAssembly of stable light-harvesting complexes (LHCs) in the chloroplast of green algae and plants requires synthesis of chlorophyll (Chl) b, a reaction that involves oxygenation of the 7-methyl group of Chl a to a formyl group. This reaction uses molecular oxygen and is catalyzed by chlorophyllide a oxygenase (CAO). The amino acid sequence of CAO predicts mononuclear iron and Rieske iron-sulfur centers in the protein. The mechanism of synthesis of Chl b and localization of this reaction in the chloroplast are essential steps toward understanding LHC assembly.

resultsFluorescence of a CAO-GFP fusion protein, transiently expressed in young pea leaves, was found at the periphery of mature chloroplasts and on thylakoid membranes by confocal fluorescence microscopy. However, when membranes from partially degreened cells of Chlamydomonas reinhardtii cw15 were resolved on sucrose gradients, full-length CAO was detected by immunoblot analysis only on the chloroplast envelope inner membrane. The electron paramagnetic resonance spectrum of CAO included a resonance at g = 4.3, assigned to the predicted mononuclear iron center. Instead of a spectrum of the predicted Rieske iron-sulfur center, a nearly symmetrical, approximately 100 Gauss peak-to-trough signal was observed at g = 2.057, with a sensitivity to temperature characteristic of an iron-sulfur center. A remarkably stable radical in the protein was revealed by an isotropic, 9 Gauss peak-to-trough signal at g = 2.0042. Fragmentation of the protein after incorporation of 125I- identified a conserved tyrosine residue (Tyr-422 in Chlamydomonas and Tyr-518 in Arabidopsis) as the radical species. The radical was quenched by chlorophyll a, an indication that it may be involved in the enzymatic reaction.

conclusionCAO was found on the chloroplast envelope and thylakoid membranes in mature chloroplasts but only on the envelope inner membrane in dark-grown C. reinhardtii cells. Such localization provides further support for the envelope membranes as the initial site of Chl b synthesis and assembly of LHCs during chloroplast development. Identification of a tyrosine radical in the protein provides insight into the mechanism of Chl b synthesis.

Indexed as

Amino Acid SequenceAnimalsArabidopsisChlamydomonas reinhardtiiChlorophyllElectron Spin Resonance SpectroscopyEscherichia coliFree RadicalsGreen Fluorescent ProteinsImmunoblottingIodidesIron-Sulfur ProteinsLuminescent ProteinsMicroscopy, ConfocalMolecular Sequence DataOxygenasesChlorophyllchlorophyll a oxygenasechlorophyll bFree RadicalsGreen Fluorescent ProteinsIodidesIron-Sulfur ProteinsLuminescent ProteinsOxygenasesRecombinant Fusion ProteinsRecombinant Proteins

Identifiers

PMID15086960
PMCPMC406501
OpenAlexW1577923848

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.