Evidence map›Paper›PMID 15085203›Full record

ArticleThe Journal of clinical investigation2004

A preoperative diagnostic test that distinguishes benign from malignant thyroid carcinoma based on gene expression.

Janete M Cerutti, Rosana Delcelo, Marcelo João Amadei, Claudia Nakabashi, Rui M B Maciel, Bercedis Peterson, Jennifer Shoemaker, Gregory J Riggins

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Transcriptomic analysis reveals thatGenes & diseases · 2024
    Article
  7. Article
  8. Article
  9. Aberrant Expression of Thymosin Beta-4 Correlates With Advanced Disease and BRAF V600E Mutation in Thyroid Cancer.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2022
    Article
  10. Article
  11. Frontiers in cell and developmental biology · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Immune Landscape of Thyroid Cancers: New Insights.Frontiers in endocrinology · 2020
    Review
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Janete M CeruttiLaboratory of Molecular Endocrinology, Division of Endocrinology, Department of Medicine, Federal University of São Paulo, Brazil.
Rosana Delcelo
Marcelo João Amadei
Claudia Nakabashi
Rui M B Maciel
Bercedis Peterson
Jennifer Shoemaker
Gregory J Riggins

Funding

A MOLECULAR CLASSIFICATION OF BRAIN TUMORSU01CA088128 · NCI · JOHNS HOPKINS UNIVERSITY · PI RIGGINS, GREGORY JOSEPH · 2000 to 2004
$2.9M
Preoperative and follow-up tests for thyroid tumorsR21CA113461 · NCI · JOHNS HOPKINS UNIVERSITY · PI RIGGINS, GREGORY JOSEPH · 2006 to 2006
$240k
NCI NIH HHS R21 CA113461NCI NIH HHS U01 CA088128NCI NIH HHS U01 CA88128PHS HHS S98-146
6 · The paper itself

Abstract

Accurate diagnosis of thyroid tumors is challenging. A particular problem is distinguishing between follicular thyroid carcinoma (FTC) and benign follicular thyroid adenoma (FTA), where histology of fine-needle aspirates is not conclusive. It is often necessary to remove healthy thyroid to rule out carcinoma. In order to find markers to improve diagnosis, we quantified gene transcript expression from FTC, FTA, and normal thyroid, revealing 73 differentially expressed transcripts (P < or = 0.0001). Using an independent set of 23 FTCs, FTAs, and matched normal thyroids, 17 genes with large expression differences were tested by real-time RT-PCR. Four genes (DDIT3, ARG2, ITM1, and C1orf24) differed between the two classes FTC and FTA, and a linear combination of expression levels distinguished FTC from FTA with an estimated predictive accuracy of 0.83. Furthermore, immunohistochemistry for DDIT3 and ARG2 showed consistent staining for carcinoma in an independent set 59 follicular tumors (estimated concordance, 0.76; 95% confidence interval, [0.59, 0.93]). A simple test based on a combination of these markers might improve preoperative diagnosis of thyroid nodules, allowing better treatment decisions and reducing long-term health costs.

Indexed as

Gene Expression ProfilingAdenocarcinoma, FollicularAdenomaAdultAgedBiopsy, NeedleCarrier ProteinsCCAAT-Enhancer-Binding ProteinsChildFemaleHexosyltransferasesHumansImmunohistochemistryMaleMembrane ProteinsMiddle AgedABI3BP protein, humanCarrier ProteinsCCAAT-Enhancer-Binding ProteinsDDIT3 protein, humanHexosyltransferasesMembrane ProteinsSTT3A protein, humanTranscription Factor CHOPTranscription Factors

Identifiers

PMID15085203
PMCPMC385398

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.