Evidence map›Paper›PMID 15084749›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

The Arabidopsis repressor of light signaling, COP1, is regulated by nuclear exclusion: mutational analysis by bioluminescence resonance energy transfer.

Chitra Subramanian, Byung-Hoon Kim, Nicholas N Lyssenko, Xiaodong Xu, Carl Hirschie Johnson, Albrecht G von Arnim

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
21.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 130 citations in OpenAlex.

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  9. Article
  10. Light Induced Regulation Pathway of Anthocyanin Biosynthesis in Plants.International journal of molecular sciences · 2021
    Review
  11. Constitutive Photomorphogenic 1 Enhances ER Stress Tolerance in Arabidopsis.International journal of molecular sciences · 2021
    Article
  12. Phytochrome Signaling Networks.Annual review of plant biology · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chitra SubramanianDepartment of Botany, University of Tennessee, Knoxville, TN 37996-1100, USA.
Byung-Hoon Kim
Nicholas N Lyssenko
Xiaodong Xu
Carl Hirschie Johnson
Albrecht G von Arnim
Vanderbilt University · USUniversity of Tennessee at Knoxville · US

Funding

BRET Interaction System for Circadian Clock ProteinsR01GM065467 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2002 to 2005
$825k
NIGMS NIH HHS GM65467NIGMS NIH HHS R01 GM065467
6 · The paper itself

Abstract

Bioluminescence resonance energy transfer (BRET) between Renilla luciferase and yellow fluorescent protein has been adapted to serve as a real-time reporter on protein-protein interactions in live plant cells by using the Arabidopsis Constitutive photomorphogenesis 1 (COP1) protein as a model system. COP1 is a repressor of light signal transduction that functions as part of a nuclear E3 ubiquitin ligase. COP1 possesses a leucine-rich nuclear-exclusion signal that resides in a domain implicated in COP1 dimerization. BRET was applied in conjunction with site-directed mutagenesis to explore the respective contributions of the nuclear-exclusion and dimerization motifs to the regulation of COP1 activity in vivo. One specific mutant protein, COP1(L105A), showed increased nuclear accumulation but retained the ability to dimerize, as monitored by BRET, whereas other mutations inhibited both nuclear exclusion and COP1 dimerization. Mutant rescue and overexpression experiments indicated that nuclear exclusion of COP1 protein is a rate-limiting step in light signal transduction.

Indexed as

LightAmino Acid SequenceArabidopsisArabidopsis ProteinsCell NucleusDimerizationEnergy TransferGenetic Complementation TestLuminescent MeasurementsMolecular Sequence DataSequence Homology, Amino AcidSignal TransductionUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisUbiquitin-Protein Ligases

Identifiers

PMID15084749
PMCPMC404125
OpenAlexW1965939942

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.