Evidence map›Paper›PMID 15082794›Full record

ArticleMolecular and cellular biology2004

Anatomy and dynamics of DNA replication fork movement in yeast telomeric regions.

Svetlana Makovets, Ira Herskowitz, Elizabeth H Blackburn

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 153 citations in OpenAlex.

  1. Article
  2. Article
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  4. Review
  5. Article
  6. Interstitial telomeric sequences promote gross chromosomal rearrangement via multiple mechanisms.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Telomere maintenance and the DNA damage response: a paradoxical alliance.Frontiers in cell and developmental biology · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Svetlana MakovetsUniversity of California, San Francisco, Department of Biochemistry and Biophysics, San Francisco, California 94143-2200,USA.
Ira Herskowitz
Elizabeth H Blackburn
University of California, San Francisco · US

Funding

THE FUNCTION OF TELOMERASE AND TELOMERESR01GM026259 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BLACKBURN, ELIZABETH H · 1985 to 2014
$8.9M
GENETIC CONTROL OF MATING IN YEASTR01GM059466 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI KORNBERG, THOMAS B. · 1999 to 2002
$822k
STRUCTURE AND FUNCTION OF TELOMERESR37GM026259 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BLACKBURN, ELIZABETH H · 1989 to 1998
–
NIGMS NIH HHS GM26259NIGMS NIH HHS GM59466NIGMS NIH HHS R01 GM026259NIGMS NIH HHS R37 GM026259
6 · The paper itself

Abstract

Replication initiation and replication fork movement in the subtelomeric and telomeric DNA of native Y' telomeres of yeast were analyzed using two-dimensional gel electrophoresis techniques. Replication origins (ARSs) at internal Y' elements were found to fire in early-mid-S phase, while ARSs at the terminal Y' elements were confirmed to fire late. An unfired Y' ARS, an inserted foreign (bacterial) sequence, and, as previously reported, telomeric DNA each were shown to impose a replication fork pause, and pausing is relieved by the Rrm3p helicase. The pause at telomeric sequence TG(1-3) repeats was stronger at the terminal tract than at the internal TG(1-3) sequences located between tandem Y' elements. We show that the telomeric replication fork pause associated with the terminal TG(1-3) tracts begins approximately 100 bp upstream of the telomeric repeat tract sequence. Telomeric pause strength was dependent upon telomere length per se and did not require the presence of a variety of factors implicated in telomere metabolism and/or known to cause telomere shortening. The telomeric replication fork pause was specific to yeast telomeric sequence and was independent of the Sir and Rif proteins, major known components of yeast telomeric heterochromatin.

Indexed as

DNA ReplicationNucleic Acid ConformationAnimalsBase CompositionBinding SitesCell CycleCell Cycle ProteinsDNADNA HelicasesProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTelomereTelomere-Binding ProteinsCell Cycle ProteinsDNADNA HelicasesRrm3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTelomere-Binding Proteins

Identifiers

PMID15082794
PMCPMC387773
OpenAlexW2130985414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.