Evidence map›Paper›PMID 15075264›Full record

ArticleEukaryotic cell2004

Identification, mutational analysis, and coactivator requirements of two distinct transcriptional activation domains of the Saccharomyces cerevisiae Hap4 protein.

John L Stebbins, Steven J Triezenberg

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

John L StebbinsGraduate Program in Genetics and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824-1319, USA.
Steven J Triezenberg
Michigan State University · US

Funding

TRANS-ACTIVATED EXPRESSION OF HSV IMMEDIATE EARLY GENESR21AI027323 · NIAID · MICHIGAN STATE UNIVERSITY · PI TRIEZENBERG, STEVEN J. · 2001 to 2001
$297k
TRANS-ACTIVATED EXPRESSION OF HSV IMMEDIATE-EARLY GENESR01AI027323 · NIAID · MICHIGAN STATE UNIVERSITY · PI TRIEZENBERG, STEVEN J. · 1989 to 2000
$260k
NIAID NIH HHS AI27323
6 · The paper itself

Abstract

The Hap4 protein of the budding yeast Saccharomyces cerevisiae activates the transcription of genes that are required for growth on nonfermentable carbon sources. Previous reports suggested the presence of a transcriptional activation domain within the carboxyl-terminal half of Hap4 that can function in the absence of Gcn5, a transcriptional coactivator protein and histone acetyltransferase. The boundaries of this activation domain were further defined to a region encompassing amino acids 359 to 476. Within this region, several clusters of hydrophobic amino acids are critical for transcriptional activity. This activity does not require GCN5 or two other components of the SAGA coactivator complex, SPT3 and SPT8, but it does require SPT7 and SPT20. Contrary to previous reports, a Hap4 fragment comprising amino acids 1 to 330 can support the growth of yeast on lactate medium, and when tethered to lexA, can activate a reporter gene with upstream lexA binding sites, demonstrating the presence of a second transcriptional activation domain. In contrast to the C-terminal activation domain, the transcriptional activity of this N-terminal region depends on GCN5. We conclude that the yeast Hap4 protein has at least two transcriptional activation domains with strikingly different levels of dependence on specific transcriptional coactivator proteins.

Indexed as

Amino Acid MotifsAmino Acid Sequencebeta-GalactosidaseCCAAT-Binding FactorDNA-Binding ProteinsDNA Mutational AnalysisGene Expression Regulation, FungalGenes, ReporterHistone AcetyltransferasesHydrophobic and Hydrophilic InteractionsLactatesMolecular Sequence Datap300-CBP-Associated FactorPoint MutationProtein KinasesProtein Structure, Tertiarybeta-GalactosidaseCCAAT-Binding FactorDNA-Binding ProteinsGCN5 protein, S cerevisiaeHAP4 protein, S cerevisiaeHistone AcetyltransferasesLactatesp300-CBP-Associated FactorProtein KinasesSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID15075264
PMCPMC387635
OpenAlexW2135727030

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.