Evidence map›Paper›PMID 15071038›Full record

ArticleJournal of clinical microbiology2004

Unique variations of pbp2b sequences in penicillin-nonsusceptible Streptococcus pneumoniae isolates from Korea.

Jin Yang Baek, Kwan Soo Ko, Won Sup Oh, Sook-In Jung, Yeon Sook Kim, Hyun-Ha Chang, Hyuck Lee, Shin Woo Kim, Kyong Ran Peck, Nam Yong Lee and 1 more

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular characteristics of penicillin-binding protein 2b, 2x and 1a sequences in Streptococcus pneumoniae isolates causing invasive diseases among children in Northeast China.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Jin Yang BaekAsian-Pacific Research Foundation for Infectious Diseases,, Seoul 135-710, Korea.
Kwan Soo Ko
Won Sup Oh
Sook-In Jung
Yeon Sook Kim
Hyun-Ha Chang
Hyuck Lee
Shin Woo Kim
Kyong Ran Peck
Nam Yong Lee
Jae-Hoon Song
Office of Infectious Diseases · USChonnam National University · KRChungnam National University Hospital · KRDong-A University Hospital · KRKyung Hee University Medical Center · KRSamsung Medical Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

pbp2b gene alterations were analyzed in 102 clinical isolates of Streptococcus pneumoniae (30 penicillin susceptible, 23 intermediate, and 49 resistant) from Korea. On the basis of PBP2B amino acid sequences, penicillin-nonsusceptible isolates of S. pneumoniae belonged to six groups, and 76% of the isolates in groups I to IV showed the same divergent block of amino acid alterations. Thirteen isolates (group II) also possessed a divergent block that was identical to that of Streptococcus oralis. The pbp2b genes of most Korean isolates showed novel mosaic mutations due to horizontal gene transfer. The Thr252 --> Ala substitution, previously thought to be associated only with penicillin-nonsusceptible strains, was also found in three penicillin-susceptible strains. On the basis of their pbp2b nucleotide sequences, all penicillin-nonsusceptible isolates can be detected by multiplex PCR, which can be used as a novel method for detection of antibiotic-resistant pneumococcal strains in clinical specimens.

Indexed as

AminoacyltransferasesGenetic VariationAmino Acid SequenceBacterial ProteinsCarrier ProteinsHexosyltransferasesHumansKoreaMicrobial Sensitivity TestsMolecular Sequence DataMuramoylpentapeptide CarboxypeptidasePenicillin-Binding ProteinsPenicillin ResistancePenicillinsPeptidyl TransferasesPneumococcal InfectionsAminoacyltransferasesBacterial ProteinsCarrier ProteinsHexosyltransferasesMuramoylpentapeptide Carboxypeptidasepenicillin-binding protein 2b, StreptococcusPenicillin-Binding ProteinsPenicillinsPeptidyl Transferases

Identifiers

PMID15071038
PMCPMC387593
OpenAlexW2138859748

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.