Evidence map›Paper›PMID 15068391›Full record

ArticleMolecular diagnosis : a journal devoted to the understanding of human disease through the clinical application of molecular biology2003

PCR-based detection of a cystic fibrosis epidemic strain of Pseudomonas Aeruginosa.

Stavroula Panagea, Craig Winstanley, Yasmin N Parsons, Martin J Walshaw, Martin J Ledson, C Anthony Hart

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In one paragraph

Article in Molecular diagnosis : a journal devoted to the understanding of human disease through the clinical application of molecular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Virulence Mechanisms ofFrontiers in microbiology · 2022
    Review
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  4. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stavroula PanageaDepartment of Medical Microbiology and Genitourinary Medicine, University of Liverpool, Liverpool, UK. vivkypanagea@doctors.org.uk
Craig Winstanley
Yasmin N Parsons
Martin J Walshaw
Martin J Ledson
C Anthony Hart
University of Liverpool · GBCystic Fibrosis Trust · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Liverpool epidemic strain (LES) of Pseudomonas aeruginosa is widespread among patients with cystic fibrosis (CF) in specialist centers around Liverpool and elsewhere in the UK. This study evaluates a new diagnostic PCR assay based on a unique DNA sequence (PS21) of LES, for its identification of colonies directly from sputum.

methodsOne hundred and fifty-eight sputum samples from 92 patients were cultured and P. aeruginosa isolates were typed by PS21 PCR and pulsed-field gel electrophoresis (PFGE). Subsequently, PS21 PCR was performed directly on sputum and the results were compared with culture, PFGE, and PS21 PCR typing.

resultsEighty patients were colonized with P. aeruginosa, 63 by LES (79%). There was 100% concordance between PS21 PCR on colonies and PFGE typing. The sensitivity and specificity of PS21 PCR directly on sputum was 98.2% and 93.6%, respectively.

conclusionsThis study shows that PS21 PCR can be used for simple and rapid screening of LES colonization in CF patients.

Indexed as

Base SequenceCystic FibrosisDNA, BacterialDNA PrimersElectrophoresis, Gel, Pulsed-FieldHumansPolymerase Chain ReactionPseudomonas aeruginosaPseudomonas InfectionsSputumDNA, BacterialDNA Primers

Identifiers

PMID15068391
OpenAlexW1992321166

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.