Evidence map›Paper›PMID 15066853›Full record

ArticleApplied and environmental microbiology2004

Vibrio fischeri sigma54 controls motility, biofilm formation, luminescence, and colonization.

Alan J Wolfe, Deborah S Millikan, Joy M Campbell, Karen L Visick

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The type-VI secretion system of the beneficial symbiontMicrobiology (Reading, England) · 2023
    Review
  7. Article
  8. Mutational Analysis ofJournal of bacteriology · 2022
    Article
  9. The Regulatory Functions of σInternational journal of molecular sciences · 2021
    Review
  10. Article
  11. Review
  12. Article
  13. PeerJ · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. σScientific reports · 2019
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alan J WolfeDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois 60153, USA.
Deborah S Millikan
Joy M Campbell
Karen L Visick

Funding

REQUIREMENTS FOR BACTERIAL COLONIZATION OF ANIMAL TISSUER01GM059690 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI VISICK, KAREN L · 2000 to 2013
$3.4M
NIGMS NIH HHS GM59690NIGMS NIH HHS R01 GM059690
6 · The paper itself

Abstract

In this study, we demonstrated that the putative Vibrio fischeri rpoN gene, which encodes sigma(54), controls flagellar biogenesis, biofilm development, and bioluminescence. We also show that rpoN plays a requisite role initiating the symbiotic association of V. fischeri with juveniles of the squid Euprymna scolopes.

Indexed as

DNA-Binding ProteinsBiofilmsDNA-Directed RNA PolymerasesGenes, BacterialIronLuminescenceMolecular Sequence DataMovementMutationNitrogenPlasmidsRNA Polymerase Sigma 54Sigma FactorVibrioDNA-Binding ProteinsDNA-Directed RNA PolymerasesIronNitrogenRNA Polymerase Sigma 54Sigma Factor

Identifiers

PMID15066853
PMCPMC383144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.