Evidence map›Paper›PMID 15064703›Full record

ArticleOncogene2004

Haplotype sharing suggests that a genomic segment containing six genes accounts for the pulmonary adenoma susceptibility 1 (Pas1) locus activity in mice.

Giacomo Manenti, Federica Galbiati, Roberto Giannì-Barrera, Angela Pettinicchio, Abraham Acevedo, Tommaso A Dragani

Abstract read
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In one paragraph

Article in Oncogene, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 52 citations in OpenAlex.

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  12. Cancer evolution and individual susceptibility.Integrative biology : quantitative biosciences from nano to macro · 2011
    Review
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  17. The Kras2 oncogene and mouse lung carcinogenesis.Medical molecular morphology · 2008
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Giacomo ManentiDepartment of Experimental Oncology, Istituto Nazionale Tumori, Milan, Italy.
Federica Galbiati
Roberto Giannì-Barrera
Angela Pettinicchio
Abraham Acevedo
Tommaso A Dragani
Fondazione IRCCS Istituto Nazionale dei Tumori · ITUniversidad de La Laguna · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pulmonary adenoma susceptibility 1 (Pas1) locus affects inherited predisposition and resistance to chemically induced lung tumorigenesis in mice. The A/J and C57BL/6J mouse strains carry the susceptibility and resistance allele, respectively. We identified and genotyped 65 polymorphisms in the Pas1 locus region in 29 mouse inbred strains, and delimited the Pas1 locus to a minimal region of 468 kb containing six genes. That region defined a core Pas1 haplotype with 42 tightly linked markers, including intragenic polymorphisms in five genes (Bcat1, Lrmp, Las1, Ghiso, and Kras2) and amino-acid changes in three genes (Lrmp, Las1, Lmna-rs1). In (A/J x C57BL/6J)F1 mouse lung tumors, the Lmna-rs1 gene was completely downregulated, whereas allele-specific downregulation of the C57BL/6J-derived allele was observed at the Las1 gene, suggesting the potential role of these genes in tumor suppression. These results indicate a complex multigenic nature of the Pas1 locus, and point to a functional role for both intronic and exonic polymorphisms of the six genes of the Pas1 haplotype in lung tumor susceptibility.

Indexed as

Polymorphism, Single NucleotideAdenomaAllelesAmino Acid SubstitutionAnimalsChromosome MappingCrosses, GeneticFemaleGene Expression Regulation, NeoplasticGene SilencingGenes, Tumor SuppressorGenetic Predisposition to DiseaseHaplotypesLungLung NeoplasmsMaleBcat1 protein, mouseLas1 protein, mouseLmna-rs1 protein, mouseLrmp protein, mouseMembrane ProteinsRNA, MessengerRNA, NeoplasmTransaminasesTumor Suppressor ProteinsUrethane

Identifiers

PMID15064703
OpenAlexW2039957434

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.