Evidence map›Paper›PMID 15064387›Full record

ArticlePlant physiology2004

The CPH1 gene of Chlamydomonas reinhardtii encodes two forms of cryptochrome whose levels are controlled by light-induced proteolysis.

Nichole A Reisdorph, Gary D Small

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 78 citations in OpenAlex.

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  3. Diel transcriptional oscillations of light-sensitive regulatory elements in open-ocean eukaryotic plankton communities.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nichole A ReisdorphCellular and Molecular Biology Group, University of South Dakota, Vermillion, South Dakota 57069, USA.
Gary D Small
University of South Dakota · US

Funding

BLUE-LIGHT PHOTORECEPTOR GENES IN CHLAMYDOMONASR15GM059857 · NIGMS · UNIVERSITY OF SOUTH DAKOTA · PI SMALL, GARY D · 1999 to 1999
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NIGMS NIH HHS R15-GM59857
6 · The paper itself

Abstract

Cryptochromes are proteins related to DNA photolyases and have been shown to function as blue-light photoreceptors and to play important roles in circadian rhythms in both plants and animals. The CPH1 gene from Chlamydomonas reinhardtii was originally predicted to encode a putative cryptochrome protein of 867 amino acids with a predicted molecular mass of 91 kD (Small et al., 1995). However, western blotting with antibodies specific to the CPH1 protein revealed the presence of two proteins that migrate at apparent molecular mass of approximately 126 and 143 kD. A reexamination of the assigned intron-exon boundaries has shown that the previously assigned intron 7 is in fact part of exon 7 which leads to a predicted protein of 1,007 amino acids corresponding to a size of 104.6 kD. The two forms of CPH1 that migrate slower on SDS-PAGE presumably result from unknown posttranslational modifications. In C. reinhardtii cells synchronized by light to dark cycles, the two slow migrating forms of CPH1 protein accumulate in the dark and disappear rapidly in the light. Both red and blue light are effective at inducing the degradation of the CPH1 proteins. Proteasomes are implicated because degradation is inhibited by MG132, a proteasome inhibitor. Studies with deletion mutants indicate that the C-terminal region is important for both the posttranslational modification and the protein's stability under both light and dark conditions.

Indexed as

Drosophila ProteinsEye ProteinsPhotoreceptor Cells, InvertebrateAlgal ProteinsAmino Acid SequenceAnimalsChlamydomonas reinhardtiiCryptochromesCysteine EndopeptidasesElectrophoresis, Polyacrylamide GelExonsFlavoproteinsIntronsLightMolecular Sequence DataMultienzyme ComplexesAlgal Proteinscry protein, DrosophilaCryptochromesCysteine EndopeptidasesDrosophila ProteinsEye ProteinsFlavoproteinsMultienzyme ComplexesProteasome Endopeptidase ComplexProtein IsoformsReceptors, G-Protein-Coupled

Identifiers

PMID15064387
PMCPMC419830
OpenAlexW2134736771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.