Evidence map›Paper›PMID 15059961›Full record

ArticleGenes & development2004

RNase-sensitive DNA modification(s) initiates S. pombe mating-type switching.

Sonya Vengrova, Jacob Z Dalgaard

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Article
  3. The Fission Yeast Mating-Type Switching Motto: "One-for-Two" and "Two-for-One".Microbiology and molecular biology reviews : MMBR · 2023
    Review
  4. Review
  5. Article
  6. Review
  7. Genes · 2020
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Symmetry from Asymmetry or Asymmetry from Symmetry?Cold Spring Harbor symposia on quantitative biology · 2017
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sonya VengrovaMarie Curie Research Institute, The Chart, Oxted, Surrey RH8 0TL, UK.
Jacob Z Dalgaard
Marie Curie · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mating-type switching in fission yeast depends on an imprint at the mat1 locus. Previous data showed that the imprint is made in the DNA strand replicated as lagging. We now identify this imprint as an RNase-sensitive modification and suggest that it consists of one or two RNA residues incorporated into the mat1 DNA. Formation of the imprint requires swi1- and swi3-dependent pausing of the replication fork. Interestingly, swi1 and swi3 mutations that abolish pausing do not affect the use of lagging-strand priming site during replication. We show that the pausing of replication and subsequent formation of the imprint occur after the leading-strand replication complex has passed the site of the imprint and after lagging-strand synthesis has initiated at this proximal priming site. We propose a model in which a swi1- and swi3-dependent signal during lagging-strand synthesis leads to pausing of leading-strand replication and the introduction of the imprint.

Indexed as

Genomic ImprintingBase SequenceBlotting, SouthernCell Cycle ProteinsChromosomal Proteins, Non-HistoneChromosomes, FungalDNA-Binding ProteinsDNA, FungalDNA ReplicationGenes, FungalGenes, Mating Type, FungalModels, GeneticMolecular Sequence DataMutationNeoplasm ProteinsNuclear ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA, FungalNeoplasm ProteinsNuclear ProteinsRibonucleasesRNA, FungalSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsSWI1 protein, S cerevisiaeswi1 protein, S pombeSWI3 protein, S cerevisiaeTrans-ActivatorsTranscription Factors

Identifiers

PMID15059961
PMCPMC387419
OpenAlexW2132181645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.