Evidence map›Paper›PMID 15058382›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2004

Organization and expression of the SLC36 cluster of amino acid transporter genes.

John R Bermingham, Jamie Pennington

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Suppression ofInternational journal of molecular sciences · 2020
    Article
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  6. Review
  7. Review
  8. Article
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  11. Amino acid sensing and mTOR regulation: inside or out?Biochemical Society transactions · 2009
    Review
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

John R BerminghamMcLaughlin Research Institute, 1520 23rd Street South, Great Falls, Montana 59405, USA. jrbjr@po.mri.montana.edu
Jamie Pennington
McLaughlin Research Institute · US

Funding

GENETIC CONTROL OF SCHWANN CELL MYELINATIONR01NS040751 · NINDS · MC LAUGHLIN RESEARCH INSTITUTE · PI BERMINGHAM, JOHN RUTLEDGE · 2001 to 2011
$3.4M
NINDS NIH HHS NS40751
6 · The paper itself

Abstract

Three closely related genes encoding amino acid transport proteins are clustered on 5q32 in humans, and Chromosome (Chr) 11 in mice. The human SLC36A1 gene, which encodes the lysosomal amino acid transporter LYAAT1/PAT1, generates multiple alternative mRNAs, some of which encode truncated proteins. SLC36A1 is expressed in numerous tissues, whereas expression of SLC36A2, which encodes the glycine transporter tramdorinl/PAT2, is most abundant in kidney and muscle. Expression of a third gene, SLC36A3, is restricted to testis. Mouse Slc36a2 also is expressed in bone and fat tissue. Polymorphisms in human SLC36A2 exclude it as a candidate locus for a peripheral neuropathy that has been mapped to 5q31-33. SLC36A2 is a candidate gene for 5q-myelodysplastic syndrome, on the basis of its chromosomal location and its expression in bone.

Indexed as

Gene ExpressionSymportersAmino Acid SequenceAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralAnimalsBase SequenceBlotting, NorthernCarrier ProteinsDatabases, GeneticDNA, ComplementaryDNA PrimersExpressed Sequence TagsGene ComponentsHumansIn Situ HybridizationAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralCarrier ProteinsDNA, ComplementaryDNA PrimersMembrane ProteinsSLC36A1 protein, humanSlc36a1 protein, mouseSLC36A2 protein, humanSlc36a2 protein, mouseSlc36a3 protein, humanSymporters

Identifiers

PMID15058382
OpenAlexW2034253888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.