Evidence map›Paper›PMID 15054081›Full record

ArticleClinical chemistry2004

Antigenicity analysis of different regions of the severe acute respiratory syndrome coronavirus nucleocapsid protein.

Zeliang Chen, Decui Pei, Lingxiao Jiang, Yajun Song, Jin Wang, Hongxia Wang, Dongsheng Zhou, Junhui Zhai, Zongmin Du, Bei Li and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical chemistry, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 62 citations in OpenAlex.

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  10. Yeast surface display-based microfluidic immunoassay.Sensors and actuators. B, Chemical · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Zeliang ChenInstitute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing 100071, China.
Decui Pei
Lingxiao Jiang
Yajun Song
Jin Wang
Hongxia Wang
Dongsheng Zhou
Junhui Zhai
Zongmin Du
Bei Li
Maofeng Qiu
Yanping Han
Zhaobiao Guo
Ruifu Yang
Academy of Military Medical Sciences · CNInstitute of Microbiology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe widespread threat of severe acute respiratory syndrome (SARS) to human health has made urgent the development of fast and accurate analytical methods for its early diagnosis and a safe and efficient antiviral vaccine for preventive use. For this purpose, we investigated the antigenicity of different regions of the SARS coronavirus (SARS-CoV) nucleocapsid (N) protein.

methodsThe cDNA for full-length N protein and its various regions from the SARS-CoV was cloned and expressed in Escherichia coli. After purification, all of the protein fragments were printed on glass slides to fabricate a protein microarray and then probed with the sera from SARS patients to determine the reactivity of these protein fragments.

resultsThe full-length protein and two other fragments reacted with all 52 sera tested. Four important regions with possible epitopes were identified and named as EP1 (amino acids 51-71), EP2 (134-208), EP3 (249-273), and EP4 (349-422), respectively. EP2 and EP4 possessed linear epitopes, whereas EP1 and EP2 were able to form conformational epitopes that could react with most (>80%) of the tested sera. EP3 and EP4 also formed conformational epitopes, and antibodies against these epitopes existed in all 52 of the sera tested.

conclusionThe N protein is a highly immunogenic protein of the SARS-CoV. Conformational epitopes are important for this protein, and antigenicity of the COOH terminus is higher than that of the NH(2) terminus. The N protein is a potential diagnostic antigen and vaccine candidate for SARS-CoV.

Indexed as

Antigens, ViralCloning, MolecularCoronavirus Nucleocapsid ProteinsDNA, ComplementaryEpitopesEscherichia coliHumansNucleocapsid ProteinsProtein Array AnalysisSevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusAntigens, ViralCoronavirus Nucleocapsid ProteinsDNA, ComplementaryEpitopesNucleocapsid Proteins

Identifiers

PMID15054081
PMCPMC7108132
OpenAlexW2149970341

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.