Evidence map›Paper›PMID 15051885›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Distinguishing human ethnic groups by means of sequences from Helicobacter pylori: lessons from Ladakh.

Thierry Wirth, Xiaoyan Wang, Bodo Linz, Richard P Novick, J Koji Lum, Martin Blaser, Giovanna Morelli, Daniel Falush, Mark Achtman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 151 citations in OpenAlex.

  1. Pathogenomics of Helicobacter pylori.Current topics in microbiology and immunology · 2023
    Review
  2. Article
  3. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Article
  5. Molecular Phylogenetic Analysis ofInternational journal of microbiology · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Cooperation of Gastric Mononuclear Phagocytes withJournal of immunology (Baltimore, Md. : 1950) · 2017
    Article
  10. Review
  11. Gut pathogens · 2017
    Article
  12. Article
  13. How old are bacterial pathogens?Proceedings. Biological sciences · 2016
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Thierry WirthDepartment of Molecular Biology, Max-Planck-Institut für Infektionsbiologie, Schumannstrasse 21/22, 10117 Berlin, Germany. thierry.wirth@uni-konstanz.de
Xiaoyan Wang
Bodo Linz
Richard P Novick
J Koji Lum
Martin Blaser
Giovanna Morelli
Daniel Falush
Mark Achtman
Tokyo Women's Medical University · JPNew York University · US

Funding

MATHEMATICAL MODELS OF H PYLORI GASTRIC COLONIZATIONR01GM063270 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BLASER, MARTIN J · 2000 to 2013
$3.1M
NIGMS NIH HHS R0 1GM 63270
6 · The paper itself

Abstract

The history of mankind remains one of the most challenging fields of study. However, the emergence of anatomically modern humans has been so recent that only a few genetically informative polymorphisms have accumulated. Here, we show that DNA sequences from Helicobacter pylori, a bacterium that colonizes the stomachs of most humans and is usually transmitted within families, can distinguish between closely related human populations and are superior in this respect to classical human genetic markers. H. pylori from Buddhists and Muslims, the two major ethnic communities in Ladakh (India), differ in their population-genetic structure. Moreover, the prokaryotic diversity is consistent with the Buddhists having arisen from an introgression of Tibetan speakers into an ancient Ladakhi population. H. pylori from Muslims contain a much stronger ancestral Ladakhi component, except for several isolates with an Indo-European signature, probably reflecting genetic flux from the Near East. These signatures in H. pylori sequences are congruent with the recent history of population movements in Ladakh, whereas similar signatures in human microsatellites or mtDNA were only marginally significant. H. pylori sequence analysis has the potential to become an important tool for unraveling short-term genetic changes in human populations.

Indexed as

EthnicityDNA, BacterialDNA, MitochondrialGenetic MarkersHelicobacter pyloriHumansMicrosatellite RepeatsPhylogenyDNA, BacterialDNA, MitochondrialGenetic Markers

Identifiers

PMID15051885
PMCPMC387319
OpenAlexW2103170067

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.