Evidence map›Paper›PMID 15047518›Full record

ArticleAntimicrobial agents and chemotherapy2004

Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production.

Niels Bagge, Martin Schuster, Morten Hentzer, Oana Ciofu, Michael Givskov, Everett Peter Greenberg, Niels Høiby

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 1 synthesis or guideline pooled it, 345 citations in OpenAlex.

  1. Antimicrobial Tolerance in Biofilms.Microbiology spectrum · 2015
    Pooled it
  2. Article
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  5. Distinctive Lacritin Cleavage-Potentiated Bactericidal Alteration of thebioRxiv : the preprint server for biology · 2026
    Article
  6. Antibiotic resistance mechanisms and global resistance patterns of Pseudomonas aeruginosa in microbial keratitis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Review
  7. R pyocin sensitivity ofJournal of medical microbiology · 2026
    Article
  8. Review
  9. Article
  10. Gene regulation inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Microorganisms · 2024
    Review
  19. Article
  20. Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Niels BaggeDepartment of Clinical Microbiology, Rigshospitalet, and Department of Bacteriology, Institute for Medical Microbiology and Immunology, Panum Institute, University of Copenhagen, Denmark. nbagge2000@yahoo.dk
Martin Schuster
Morten Hentzer
Oana Ciofu
Michael Givskov
Everett Peter Greenberg
Niels Høiby
Rigshospitalet · DKTechnical University of Denmark · DKUniversity of Iowa · USUniversity of Copenhagen · DK

Funding

QUORUM SENSING IN PSEUDOMONAS AERUGINOSAR01GM059026 · NIGMS · UNIVERSITY OF WASHINGTON · PI GREENBERG, EVERETT P · 1999 to 2019
$6.5M
NIGMS NIH HHS GM59026NIGMS NIH HHS R01 GM059026
6 · The paper itself

Abstract

The lungs of cystic fibrosis (CF) patients are commonly colonized with Pseudomonas aeruginosa biofilms. Chronic endobronchial P. aeruginosa infections are impossible to eradicate with antibiotics, but intensive suppressive antibiotic therapy is essential to maintain the lung function of CF patients. The treatment often includes beta-lactam antibiotics. How these antibiotics influence gene expression in the surviving biofilm population of P. aeruginosa is not clear. Thus, we used the microarray technology to study the effects of subinhibitory concentrations of a beta-lactam antibiotic, imipenem, on gene expression in biofilm populations. Many genes showed small but statistically significant differential expression in response to imipenem. We identified 34 genes that were induced or repressed in biofilms exposed to imipenem more than fivefold compared to the levels of induction or repression for the controls. As expected, the most strongly induced gene was ampC, which codes for chromosomal beta-lactamase. We also found that genes coding for alginate biosynthesis were induced by exposure to imipenem. Alginate production is correlated to the development of impaired lung function, and P. aeruginosa strains isolated from chronically colonized lungs of CF patients are nearly always mucoid due to the overproduction of alginate. Exposure to subinhibitory concentrations of imipenem caused structural changes in the biofilm, e.g., an increased biofilm volume. Increased levels of alginate production may be an unintended adverse consequence of imipenem treatment in CF patients.

Indexed as

AlginatesBacterial Proteinsbeta-LactamasesBiofilmsDose-Response Relationship, DrugGene Expression Regulation, BacterialGenes, BacterialImage Processing, Computer-AssistedImipenemN-Acetylmuramoyl-L-alanine AmidaseOligonucleotide Array Sequence AnalysisPolysaccharidesProtein FoldingPseudomonas aeruginosaReverse Transcriptase Polymerase Chain ReactionThienamycinsAlginatesAmpD protein, BacteriaBacterial Proteinsbeta-LactamasesImipenemN-Acetylmuramoyl-L-alanine AmidasePolysaccharidesThienamycins

Identifiers

PMID15047518
PMCPMC375275
OpenAlexW2169314851

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.