Evidence map›Paper›PMID 15031714›Full record

ArticleEMBO reports2004

Crystal structure of the PsbP protein of photosystem II from Nicotiana tabacum.

Kentaro Ifuku, Toru Nakatsu, Hiroaki Kato, Fumihiko Sato

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 105 citations in OpenAlex.

  1. Review
  2. A newly identified photosystem II Subunit P geneFrontiers in plant science · 2024
    Article
  3. PS II Subunit P inInternational journal of molecular sciences · 2023
    Article
  4. Review
  5. Article
  6. The Significance of Calcium in Photosynthesis.International journal of molecular sciences · 2019
    Review
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kentaro IfukuDivision of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
Toru Nakatsu
Hiroaki Kato
Fumihiko Sato
Kyoto University · JPRIKEN Center for Biosystems Dynamics Research · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PsbP is a membrane-extrinsic subunit of the water-oxidizing complex photosystem II (PS II). The evolutionary origin of PsbP has long been a mystery because it specifically exists in higher plants and green algae but not in cyanobacteria. We report here the crystal structure of PsbP from Nicotiana tabacum at a resolution of 1.6 A. Its structure is mainly composed of beta-sheet, and is not similar to any structures in cyanobacterial PS II. However, the electrostatic surface potential of PsbP is similar to that of cyanobacterial PsbV (cyt c(550)), which has a function similar to PsbP. A structural homology search with the DALI algorithm indicated that the folding of PsbP is very similar to that of Mog1p, a regulatory protein for the nuclear transport of Ran GTPase. The structure of PsbP provides insight into its novel function in GTP-regulated metabolism in PS II.

Indexed as

Amino Acid SequenceCrystallography, X-RayCyanobacteriaMolecular Sequence DataNicotianaNuclear ProteinsPhotosystem II Protein ComplexProtein Structure, SecondaryProtein Structure, Tertiaryran GTP-Binding ProteinSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentStatic ElectricityMOG1 protein, S cerevisiaseNuclear ProteinsPhotosystem II Protein Complexran GTP-Binding ProteinSaccharomyces cerevisiae Proteins

Identifiers

PMID15031714
PMCPMC1299024
OpenAlexW2089700614

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.