Evidence map›Paper›PMID 15022016›Full record

ArticleCurrent genetics2004

A new enrichment approach identifies genes that alter cell cycle progression in Saccharomyces cerevisiae.

Lydia M Bogomolnaya, Ritu Pathak, Roxana Cham, Jinbai Guo, Yulia V Surovtseva, Lane Jaeckel, Michael Polymenis

Abstract read
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In one paragraph

Article in Current genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. The Dcr2p phosphatase destabilizes Sic1p in Saccharomyces cerevisiae.Biochemical and biophysical research communications · 2007
    Article
  7. Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lydia M BogomolnayaDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX 77843, USA.
Ritu Pathak
Roxana Cham
Jinbai Guo
Yulia V Surovtseva
Lane Jaeckel
Michael Polymenis
Texas A&M University · US

Funding

Coordination of Cell Growth with Cell DivisionR01GM062377 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI POLYMENIS, MICHAEL S · 2001 to 2005
$1.1M
NIGMS NIH HHS GM062377NIGMS NIH HHS R01 GM062377
6 · The paper itself

Abstract

Mechanisms that coordinate cell growth with division are thought to determine the timing of initiation of cell division and to limit overall cell proliferation. To identify genes involved in this process in Saccharomyces cerevisiae, we describe a method that does not rely on cell size alterations or resistance to pheromone. Instead, our approach was based on the cell surface deposition of the Flo1p protein in cells having passed START. We found that over-expression of HXT11 (which encodes a plasma membrane transporter), PPE1 (coding for a protein methyl esterase), or SIK1 (which encodes a protein involved in rRNA processing) shortened the duration of the G1 phase of the cell cycle, prior to the initiation of DNA replication. In addition, we found that, although SIK1 was not part of a mitotic checkpoint, SIK1 over-expression caused spindle orientation defects and sensitized G2/M checkpoint mutant cells. Thus, unlike HXT11 and PPE1, SIK1 over-expression is also associated with mitotic functions. Overall, we used a novel enrichment approach and identified genes that were not previously associated with cell cycle progression. This approach can be extended to other organisms.

Indexed as

Cell Cycle ProteinsCloning, MolecularGene Expression Regulation, FungalGenes, FungalGenomic LibraryMannose-Binding LectinsMitosisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsFLO1 protein, S cerevisiaeMannose-Binding LectinsSaccharomyces cerevisiae Proteins

Identifiers

PMID15022016
OpenAlexW2064317298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.