Evidence map›Paper›PMID 15020427›Full record

ArticleGenetics2004

First-generation linkage map of the gray, short-tailed opossum, Monodelphis domestica, reveals genome-wide reduction in female recombination rates.

Paul B Samollow, Candace M Kammerer, Susan M Mahaney, Jennifer L Schneider, Scott J Westenberger, John L VandeBerg, Edward S Robinson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. Meiotic chromosome dynamics and double strand break formation in reptiles.Frontiers in cell and developmental biology · 2022
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  14. American marsupials chromosomes: Why study them?Genetics and molecular biology · 2009
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Paul B SamollowDepartment of Genetics, Southwest Foundation for Biomedical Research, San Antonio, Texas, 78245-0549, USA. pbs@darwin.sfbr.org
Candace M Kammerer
Susan M Mahaney
Jennifer L Schneider
Scott J Westenberger
John L VandeBerg
Edward S Robinson
Texas Biomedical Research Institute · USUniversity of Pittsburgh · US

Funding

UVR-INDUCED MELANOCYTIC NEVI AND PROGRESSION TO MELANOMAP01RR009919 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI VANDEBERG, JOHN L · 1994 to 1998
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NCRR NIH HHS RR-09919NCRR NIH HHS RR-14214
6 · The paper itself

Abstract

The gray, short-tailed opossum, Monodelphis domestica, is the most extensively used, laboratory-bred marsupial resource for basic biologic and biomedical research worldwide. To enhance the research utility of this species, we are building a linkage map, using both anonymous markers and functional gene loci, that will enable the localization of quantitative trait loci (QTL) and provide comparative information regarding the evolution of mammalian and other vertebrate genomes. The current map is composed of 83 loci distributed among eight autosomal linkage groups and the X chromosome. The autosomal linkage groups appear to encompass a very large portion of the genome, yet span a sex-average distance of only 633.0 cM, making this the most compact linkage map known among vertebrates. Most surprising, the male map is much larger than the female map (884.6 cM vs. 443.1 cM), a pattern contrary to that in eutherian mammals and other vertebrates. The finding of genome-wide reduction in female recombination in M. domestica, coupled with recombination data from two other, distantly related marsupial species, suggests that reduced female recombination might be a widespread metatherian attribute. We discuss possible explanations for reduced female recombination in marsupials as a consequence of the metatherian characteristic of determinate paternal X chromosome inactivation.

Indexed as

Chromosome MappingAnimalsBase SequenceDNAFemaleGenomeMaleMolecular Sequence DataOpossumsPolymorphism, GeneticPolymorphism, Restriction Fragment LengthQuantitative Trait LociRecombination, GeneticSpecies SpecificityDNA

Identifiers

PMID15020427
PMCPMC1470690
OpenAlexW2102863481

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.