Evidence map›Paper›PMID 15016872›Full record

ArticleJournal of virology2004

Transcriptional response of a common permissive cell type to infection by two diverse alphaherpesviruses.

Neelanjana Ray, L W Enquist

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 84 citations in OpenAlex.

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  6. Synaptic Inputs to the Mouse Dorsal Vagal Complex and Its Resident Preproglucagon Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Neelanjana RayDepartment of Molecular Biology, Princeton University, Princeton, New Jersey 08544-1014, USA.
L W Enquist
Princeton University · US

Funding

VIRUS AND CELL GENE EXPRESSION IN KAPOSI SARCOMA ASSOCIATED HERPESVIRUS TUMORSP01CA087661 · NCI · PRINCETON UNIVERSITY · PI SHENK, THOMAS E · 2000 to 2004
$10.9M
NCI NIH HHS 5P01 CA87661NCI NIH HHS P01 CA087661
6 · The paper itself

Abstract

Pseudorabies virus (PRV) and herpes simplex virus type 1 (HSV-1) are distantly related alphaherpesviruses whose natural hosts are pigs and humans, respectively. Adult infections of natural hosts are mild and rarely lethal. However, both viruses are also able to infect other hosts, often with lethal effects. In this report, we use the paradigm of infection of a common permissive cell type and microarray analysis to determine if these two diverse alphaherpesviruses engage similar or different cellular pathways to obtain a common outcome: productive infection. We compared cellular gene expression in growth-arrested, primary rat embryonic fibroblasts that were mock infected or infected with either purified PRV-Becker or HSV-1(F). Infections by either virus affect the transcription of more than 1,500 cellular genes by threefold or more. Few differences are detected early, and the majority of changes occur during the late stages of infection. Remarkably, the transcripts of about 500 genes are regulated in common, while the rest are regulated in a virus-specific manner. Genes whose expression is affected by infection fall into a diverse group of functional classes and cellular pathways. Furthermore, a comparison of the cellular response to HSV-1 infection of primary human and rat fibroblasts revealed unexpected diversity in the transcript profiles.

Indexed as

Gene Expression ProfilingGene Expression RegulationProtein Serine-Threonine KinasesTranscription, GeneticAnimalsApoptosisCell DivisionCells, CulturedDNA-Binding ProteinsFibroblastsHeat-Shock ResponseHerpesvirus 1, HumanHerpesvirus 1, SuidHumansInsulin-Like Growth Factor IIInterferonsDNA-Binding ProteinsInsulin-Like Growth Factor IIInterferonsInterleukin-1Membrane ProteinsMitogen-Activated Protein KinasesPhosphatidylinositol 3-KinasesProtein Serine-Threonine KinasesProto-Oncogene ProteinsProto-Oncogene Proteins c-aktReceptors, NotchSTAT3 protein, humanStat3 protein, ratSTAT3 Transcription FactorTrans-ActivatorsTransforming Growth Factor beta

Identifiers

PMID15016872
PMCPMC371087
OpenAlexW1966051474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.