Evidence map›Paper›PMID 15014978›Full record

ArticleHuman genetics2004

Extended haplotype analysis in the HLA complex reveals an increased frequency of the HFE-C282Y mutation in individuals with multiple sclerosis.

Justin P Rubio, Melanie Bahlo, Niall Tubridy, Jim Stankovich, Rachel Burfoot, Helmut Butzkueven, Caron Chapman, Laura Johnson, Mark Marriott, Grant Mraz and 6 more

Abstract read
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Article in Human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Frequency Evaluation of theInternational journal of molecular sciences · 2023
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  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Dupuytren's Contracture in Alabama HFE Hemochromatosis Probands.Clinical medicine insights. Arthritis and musculoskeletal disorders · 2012
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Justin P RubioWalter and Eliza Hall Institute of Medical Research, 3050 Parkville, Victoria, Australia. rubio@wehi.edu.au
Melanie Bahlo
Niall Tubridy
Jim Stankovich
Rachel Burfoot
Helmut Butzkueven
Caron Chapman
Laura Johnson
Mark Marriott
Grant Mraz
Brian Tait
Chris Wilkinson
Bruce Taylor
Terence P Speed
Simon J Foote
Trevor J Kilpatrick

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to resolve a multiple sclerosis (MS) susceptibility locus that we had identified in earlier work at the telomeric end of the HLA complex, we genotyped another 34 microsatellite markers (47 in total) across the class I/extended class I region in 166 Tasmanian MS case and 104 control families (D6S299-D6S265). Extended MS susceptibility haplotypes, up to 9 Mb in length, were observed in 11% of MS cases and 4% of controls. Direct comparison of the telomerically extended portion of the MS susceptibility haplotype in HFE-Cys282Tyr (C282Y)-homozygous haemochromatosis patients identified a common ancestry for this genomic segment, which translated into an increased frequency of the C282Y allele in 489 MS cases from Tasmania and Victoria (10.2%) compared with controls (6.7%). Six C282Y homozygotes (1.2%), a three-fold increased rate over the general population, and 88 heterozygotes (18%) were identified. One C282Y-homozygous female was identified who had MS and was being treated for symptoms of iron overload. Interestingly, for 71 Victorian MS cases not of north western European (NWE) ancestry, a DR15-independent reduction in the frequency of the C282Y allele was observed, supporting the theory of a NWE origin for the C282Y-variant of the DR15 ancestral haplotype (C282Y-HLA-A*0301-B*0702-DRB1*1501-DQB1*0602). The results of linkage disequilibrium (LD) and log linear modelling analyses suggest that C282Y is increased in MS cases of NWE ancestry because it is in LD with the ancestral DR15 susceptibility haplotype (7.1) and that it does not play an independent role in predisposition to MS. However, our findings provide the impetus for further investigations into the role of iron metabolism in the severity of MS.

Indexed as

DNA PrimersEuropeGene FrequencyGenes, MHC Class IHaplotypesHemochromatosis ProteinHistocompatibility Antigens Class IHumansLinear ModelsLinkage DisequilibriumMembrane ProteinsMicrosatellite RepeatsMultiple SclerosisMutationTasmaniaDNA PrimersHemochromatosis ProteinHFE protein, humanHistocompatibility Antigens Class IMembrane Proteins

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.