Evidence map›Paper›PMID 15004044›Full record

ArticleJournal of clinical microbiology2004

Comparison of conventional bacteriology with nucleic acid amplification (amplified mycobacterium direct test) for diagnosis of tuberculous meningitis before and after inception of antituberculosis chemotherapy.

Guy E Thwaites, Maxine Caws, Tran Thi Hong Chau, Nguyen Thi Dung, James I Campbell, Nguyen Hoan Phu, Tran Tinh Hien, Nicholas J White, Jeremy J Farrar

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 103 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Review
  6. Review
  7. Article
  8. Challenges in the diagnosis of tuberculous meningitis.Journal of clinical tuberculosis and other mycobacterial diseases · 2020
    Article
  9. Nontraumatic Myelopathy in Malawi: A Prospective Study in an Area with High HIV Prevalence.The American journal of tropical medicine and hygiene · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Chronic Meningitis: Simplifying a Diagnostic Challenge.Current neurology and neuroscience reports · 2016
    Article
  15. Clinical Aspects of Adult Tuberculosis.Cold Spring Harbor perspectives in medicine · 2015
    Review
  16. A Five Years Study of Tuberculous Meningitis in Iran.Iranian journal of pathology · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Guy E ThwaitesOxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam. gthwaites@hcm.vnn.vn
Maxine Caws
Tran Thi Hong Chau
Nguyen Thi Dung
James I Campbell
Nguyen Hoan Phu
Tran Tinh Hien
Nicholas J White
Jeremy J Farrar
Hospital for Tropical Diseases · VNNuffield Orthopaedic Centre · GBUniversity of Oxford · GBOxford University Clinical Research Unit · VN

Funding

Wellcome Trust
6 · The paper itself

Abstract

The role of nucleic acid amplification techniques in the rapid diagnosis of tuberculous meningitis remains uncertain. We compared the performance of Ziehl-Neelsen (ZN) staining, the Gen-Probe amplified Mycobacterium tuberculosis direct test (MTD), and culture with 341 cerebrospinal fluid specimens from 152 adults (73 with and 79 without tuberculous meningitis) before and after inception of antituberculosis chemotherapy. The sensitivity, specificity, and positive and negative predictive values of ZN staining before treatment were 34/66 (52%), 79/79 (100%), 34/34 (100%), and 79/111 (71%), compared with 25/66 (38%), 78/79 (99%), 25/26 (96%), and 79/120 (66%) for MTD. The sensitivity of combined ZN staining and MTD (either positive) was 45/66 (68%). The sensitivity of staining and culture fell more rapidly than that of MTD after the start of treatment: after 5 to 15 days of treatment, MTD was more sensitive than ZN staining (12/43 [28%] versus 2/43 [2%]; P = 0.013). Slower bacterial clearance was observed if M. tuberculosis was resistant to isoniazid and/or streptomycin: resistant organisms were more likely to be cultured from cerebrospinal fluid after 2 to 5 days of treatment than fully sensitive organisms (P < 0.001). The sensitivities of ZN staining, MTD, and the two tests combined were improved by repeated sampling to 38/59 (64%), 35/59 (59%), and 49/59 (83%), respectively. In conclusion, ZN staining of the cerebrospinal fluid is at least as good as MTD for the rapid diagnosis of tuberculosis and is much faster and less expensive. However, the combination of these methods on serial samples detects more cases. Alternative tests are still urgently required.

Indexed as

AdultAgedAntitubercular AgentsBacteriological TechniquesCerebrospinal Fluid ProteinsColoring AgentsFemaleGene AmplificationGenetic TechniquesHumansMaleMiddle AgedMycobacterium tuberculosisReproducibility of ResultsTuberculosis, MeningealVietnamAntitubercular AgentsCerebrospinal Fluid ProteinsColoring Agents

Identifiers

PMID15004044
PMCPMC356903
OpenAlexW2119303926

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.