Evidence map›Paper›PMID 14993289›Full record

ArticleMolecular and cellular biology2004

Np95 is a histone-binding protein endowed with ubiquitin ligase activity.

Elisabetta Citterio, Roberto Papait, Francesco Nicassio, Manuela Vecchi, Paola Gomiero, Roberto Mantovani, Pier Paolo Di Fiore, Ian Marc Bonapace

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 186 citations in OpenAlex.

  1. Review
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  7. Review
  8. Probing protein ubiquitination in live cells.Nucleic acids research · 2022
    Article
  9. Article
  10. Domain Structure of the Dnmt1, Dnmt3a, and Dnmt3b DNA Methyltransferases.Advances in experimental medicine and biology · 2022
    Article
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  12. Article
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  14. Article
  15. Article
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  20. Review

47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Elisabetta CitterioIstituto FIRC di Oncologia Molecolare, 20139 Milan, Italy.
Roberto Papait
Francesco Nicassio
Manuela Vecchi
Paola Gomiero
Roberto Mantovani
Pier Paolo Di Fiore
Ian Marc Bonapace
FIRC Institute of Molecular Oncology · ITEuropean Institute of Oncology · ITUniversity of Insubria · ITUniversity of Milan · IT

Funding

Telethon GGP02379
6 · The paper itself

Abstract

Np95 is an important determinant in cell cycle progression. Its expression is tightly regulated and becomes detectable shortly before the entry of cells into S phase. Accordingly, Np95 is absolutely required for the G1/S transition. Its continued expression throughout the S/G2/M phases further suggests additional roles. Indeed, Np95 has been implicated in DNA damage response. Here, we show that Np95 is tightly bound to chromatin in vivo and that it binds to histones in vivo and in vitro. The binding to histones is direct and shows a remarkable preference for histone H3 and its N-terminal tail. A novel protein domain, the SRA-YDG domain, contained in Np95 is indispensable both for the interaction with histones and for chromatin binding in vivo. Np95 contains a RING finger. We show that this domain confers E3 ubiquitin ligase activity on Np95, which is specific for core histones, in vitro. Finally, Np95 shows specific E3 activity for histone H3 when the endogenous core octamer, coimmunoprecipitating with Np95, is used as a substrate. Histone ubiquitination is an important determinant in the regulation of chromatin structure and gene transcription. Thus, the demonstration that Np95 is a chromatin-associated ubiquitin ligase suggests possible molecular mechanisms for its action as a cell cycle regulator.

Indexed as

Chromosomal Proteins, Non-HistoneAmino Acid SequenceAnimalsBinding SitesCarrier ProteinsCattleCCAAT-Enhancer-Binding ProteinsCell LineChromatinHumansIn Vitro TechniquesMiceMolecular Sequence DataNIH 3T3 CellsNuclear ProteinsProtein Structure, TertiaryCarrier ProteinsCCAAT-Enhancer-Binding ProteinsChromatinChromosomal Proteins, Non-HistoneNuclear ProteinsRecombinant ProteinsUbiquitin-Protein LigasesUhrf1 protein, mouse

Identifiers

PMID14993289
PMCPMC355858
OpenAlexW2171118762

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.