Evidence map›Paper›PMID 14991106›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004

A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers.

V Acheré, P Faivre-Rampant, S Jeandroz, G Besnard, T Markussen, A Aragones, M Fladung, E Ritter, J-M Favre

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Towards decoding the conifer giga-genome.Plant molecular biology · 2012
    Review
  7. Article
  8. Article
  9. Comparative genome mapping among Picea glauca, P. mariana x P. rubens and P. abies, and correspondence with other Pinaceae.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

V AcheréUMR INRA/UHP 1136, Tree-Microbe Interactions, Faculté des Sciences, Université Nancy I, BP 239, 54506 Vandoeuvre-lès-Nancy, France.
P Faivre-Rampant
S Jeandroz
G Besnard
T Markussen
A Aragones
M Fladung
E Ritter
J-M Favre
Université de Lorraine · FRNEIKER, the Basque Institute for Agricultural Research and Development · ESNordwestdeutsche Forstliche Versuchsanstalt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Based on an F(1) progeny of 73 individuals, two parental maps were constructed according to the double pseudo-test cross strategy. The paternal map contained 16 linkage groups for a total genetic length of 1,792 cM. The maternal map covered 1,920 cM, and consisted of 12 linkage groups. These parental maps were then integrated using 66 intercross markers. The resulting consensus map covered 2,035 cM and included 755 markers (661 AFLPs, 74 SSRs, 18 ESTPs, the 5S rDNA and the early cone formation trait) on 12 linkage groups, reflecting the haploid number of chromosomes of Picea abies. The average spacing between two adjacent markers was 2.6 cM. The presence of 39 of the SSR and/or ESTP markers from this consensus map on other published maps of different Picea and Pinus species allowed us to establish partial linkage group homologies across three P. abies maps (up to five common markers per linkage group). This first saturated linkage map of P. abies could be therefore used as a support for developing comparative genome mapping in conifers.

Indexed as

Chromosome MappingExpressed Sequence TagsChromosomes, PlantDNA, RibosomalGenetic MarkersGenome, PlantGenomicsKaryotypingMicrosatellite RepeatsPhenotypePiceaPolymorphism, GeneticRNA, Ribosomal, 5SDNA, RibosomalGenetic MarkersRNA, Ribosomal, 5S

Identifiers

PMID14991106
OpenAlexW2072835407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.