Evidence map›Paper›PMID 14988732›Full record

ArticleThe EMBO journal2004

Roles of histone acetylation and chromatin remodeling factor in a meiotic recombination hotspot.

Takatomi Yamada, Ken-ichi Mizuno, Kouji Hirota, Ning Kon, Wayne P Wahls, Edgar Hartsuiker, Hiromu Murofushi, Takehiko Shibata, Kunihiro Ohta

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 164 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Epigenetic regulation during meiosis and crossover.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  8. Chromosome-dependent aneuploid formation in Spo11-less meiosis.Genes to cells : devoted to molecular & cellular mechanisms · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Gametogenesis: A journey from inception to conception.Current topics in developmental biology · 2019
    Review
  18. Article
  19. Review
  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Takatomi YamadaGenetic Dynamics Research Unit-Laboratory, RIKEN, Wako, Saitama, Japan.
Ken-ichi Mizuno
Kouji Hirota
Ning Kon
Wayne P Wahls
Edgar Hartsuiker
Hiromu Murofushi
Takehiko Shibata
Kunihiro Ohta
RIKEN · JPUniversity of Arkansas for Medical Sciences · USThe University of Tokyo · JPTokyo University of Science · JPUniversity of Sussex · GB

Funding

Combinatoial CREB/ATF dimers and cellular growth controlR01GM062801 · NIGMS · VANDERBILT UNIVERSITY · PI WAHLS, WAYNE P · 2001 to 2004
$1.0M
REGULATION OF MEIOTIC DEVELOPMENT BY MTS1-MTS2 PROTEINR01GM062244 · NIGMS · VANDERBILT UNIVERSITY · PI WAHLS, WAYNE P · 2001 to 2004
$1.0M
NIGMS NIH HHS GM62244NIGMS NIH HHS GM62801NIGMS NIH HHS R01 GM062244NIGMS NIH HHS R01 GM062801
6 · The paper itself

Abstract

Histone acetyltransferases (HATs) and ATP-dependent chromatin remodeling factors (ADCRs) are involved in selective gene regulation via modulation of local chromatin configuration. Activation of the recombination hotspot ade6-M26 of Schizosaccharomyces pombe is mediated by a cAMP responsive element (CRE)-like sequence, M26, and a heterodimeric ATF/CREB transcription factor, Atf1.Pcr1. Chromatin remodeling occurs meiotically around M26. We examined the roles of HATs and ADCRs in chromatin remodeling around M26. Histones H3 and H4 around M26 were hyperacetylated in an M26- and Atf1-dependent manner early in meiosis. SpGcn5, the S. pombe homolog of Gcn5p, was required for the majority of histone H3 acetylation around M26 in vivo. Deletion of gcn5+ caused a significant delay in chromatin remodeling but only partial reduction of M26 meiotic recombination frequency. The snf22+ (a Swi2/Snf2-ADCR homologue) deletion and snf22+ gcn5+ double deletion abolished chromatin remodeling and significant reduction of meiotic recombination around M26. These results suggest that HATs and ADCRs cooperatively alter local chromatin structure, as in selective transcription activation, to activate meiotic recombination at M26 in a site-specific manner.

Indexed as

Chromatin Assembly and DisassemblyAcetylationAcetyltransferasesActivating Transcription Factor 1Activating Transcription FactorsAmino Acid SequenceDNA-Binding ProteinsGene DeletionGenes, FungalHistonesMeiosisMolecular Sequence Datap300-CBP-Associated FactorPhosphoproteinsRecombination, GeneticSchizosaccharomycesAcetyltransferasesActivating Transcription Factor 1Activating Transcription Factorsatf1 protein, S pombeDNA-Binding ProteinsGcn5 protein, S pombeHistonesp300-CBP-Associated FactorPcr1 protein, S pombePhosphoproteinsSchizosaccharomyces pombe Proteinssnf22 protein, S pombeTranscription Factors

Identifiers

PMID14988732
PMCPMC394230
OpenAlexW2157102484

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.