Evidence map›Paper›PMID 14988506›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Dissecting virulence: systematic and functional analyses of a pathogenicity island.

Wanyin Deng, José L Puente, Samantha Gruenheid, Yuling Li, Bruce A Vallance, Alejandra Vázquez, Jeannette Barba, J Antonio Ibarra, Paul O'Donnell, Pavel Metalnikov and 5 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 355 papers.

0numbers the graph read from it
0cells of the map it votes in
355citing papers in PubMed
29.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

355 citing papers in PubMed, 614 citations in OpenAlex.

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  18. PNAS nexus · 2024
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    Article

295 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Wanyin DengBiotechnology Laboratory, University of British Columbia, Vancouver, BC, Canada V6T 1Z3.
José L Puente
Samantha Gruenheid
Yuling Li
Bruce A Vallance
Alejandra Vázquez
Jeannette Barba
J Antonio Ibarra
Paul O'Donnell
Pavel Metalnikov
Keith Ashman
Sansan Lee
David Goode
Tony Pawson
B Brett Finlay
Mount Sinai Hospital · CAUniversity of British Columbia · CALunenfeld-Tanenbaum Research Institute · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial pathogenicity islands (PAI) often encode both effector molecules responsible for disease and secretion systems that deliver these effectors to host cells. Human enterohemorrhagic Escherichia coli (EHEC), enteropathogenic E. coli, and the mouse pathogen Citrobacter rodentium (CR) possess the locus of enterocyte effacement (LEE) PAI. We systematically mutagenized all 41 CR LEE genes and functionally characterized these mutants in vitro and in a murine infection model. We identified 33 virulence factors, including two virulence regulators and a hierarchical switch for type III secretion. In addition, 7 potential type III effectors encoded outside the LEE were identified by using a proteomics approach. These non-LEE effectors are encoded by three uncharacterized PAIs in EHEC O157, suggesting that these PAIs act cooperatively with the LEE in pathogenesis. Our findings provide significant insights into bacterial virulence mechanisms and disease.

Indexed as

Genomic IslandsAnimalsCitrobacter rodentiumEnterobacteriaceae InfectionsEscherichia coliGene Expression Regulation, BacterialGenes, BacterialHumansMiceMice, Inbred C3HMice, Inbred C57BLVirulenceVirulence FactorsVirulence Factors

Identifiers

PMID14988506
PMCPMC373508
OpenAlexW1985396638

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.