Evidence map›Paper›PMID 14985473›Full record

ArticleNucleic acids research2004

A high-throughput method to monitor the expression of microRNA precursors.

Thomas D Schmittgen, Jinmai Jiang, Qian Liu, Liuqing Yang

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 187 papers.

0numbers the graph read from it
0cells of the map it votes in
187citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

187 citing papers in PubMed, 481 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. RNA mGenes & diseases · 2024
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  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Expression Profiles of Estrogen-Regulated MicroRNAs in Cancer Cells.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  16. Experimental MicroRNA Targeting Validation.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  17. Article
  18. Mirna Expression in Glaucomatous and TGFβ2 Treated Lamina Cribrosa Cells.International journal of molecular sciences · 2021
    Article
  19. Review
  20. Review

127 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Thomas D SchmittgenDivision of Pharmaceutics, College of Pharmacy, The Ohio State University, Columbus, OH 43210, USA. Schmittgen.2@osu.edu
Jinmai Jiang
Qian Liu
Liuqing Yang
The Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

microRNAs (miRNAs) are small, functional, non-coding RNAs. miRNAs are transcribed as long primary transcripts (primary precursors) that are processed to the approximately 75 nt precursors (pre-miRNAs) by the nuclear enzyme Drosha. The approximately 22 nt mature miRNA is processed from the pre-miRNA by the RNase III Dicer. The vast majority of published studies to date have used northern blotting to detect the expression of miRNAs. We describe here a sensitive, high throughput, real-time PCR assay to monitor the expression of miRNA precursors. Gene-specific primers and reverse transcriptase were used to convert the primary precursors and pre-miRNAs to cDNA. The expression of 23 miRNA precursors in six human cancer cell lines was assayed using the PCR assay. The miRNA precursors accumulated to different levels when compared with each other or when a single precursor is compared in the various cell lines. The precursor expression profile of three miRNAs determined by the PCR assay was identical to the mature miRNA expression profile determined by northern blotting. We propose that the PCR assay may be scaled up to include all of the 150+ known human miRNA genes and can easily be adaptable to other organisms such as plants, Caenorhabditis elegans and Drosophila.

Indexed as

Blotting, NorthernCell Line, TumorGene Expression ProfilingHeLa CellsHumansMicroRNAsPolymerase Chain ReactionReproducibility of ResultsRibonuclease IIIRNA PrecursorsRNA, Small NuclearSensitivity and SpecificityTime FactorsTranscription, GeneticMicroRNAsRibonuclease IIIRNA PrecursorsRNA, Small NuclearU6 small nuclear RNA

Identifiers

PMID14985473
PMCPMC390315
OpenAlexW2131118100

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.