Evidence map›Paper›PMID 14984104›Full record

ReviewChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2004

Flow cytogenetics and plant genome mapping.

Jaroslav Dolezel, Marie Kubaláková, Jan Bartos, Jirí Macas

Abstract readReview
PubMed Publisher
In one paragraph

Review in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Chromosome analysis and sorting.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Review
  3. Molecular Cytogenetic Identification of Wheat-International journal of molecular sciences · 2020
    Article
  4. Article
  5. Article
  6. Article
  7. Chromosomes in the flow to simplify genome analysis.Functional & integrative genomics · 2012
    Review
  8. Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  9. Integration of genetic and physical maps of the chickpea (Cicer arietinum L.) genome using flow-sorted chromosomes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2011
    Article
  10. Article
  11. Article
  12. Isolated chromosomes as a new and efficient source of DArT markers for the saturation of genetic maps.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010
    Article
  13. Recent advances in rice genome and chromosome structure research by fluorescence in situ hybridization (FISH).Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2010
    Review
  14. Article
  15. Article
  16. Development of microsatellite markers specific for the short arm of rye (Secale cereale L.) chromosome 1.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jaroslav DolezelLaboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Sokolorakrá 6, Olomouc, CZ-77200, Czech Republic. dolezel@ueb.cas.cz
Marie Kubaláková
Jan Bartos
Jirí Macas
Czech Academy of Sciences, Institute of Experimental Botany · CZInstitute of Plant Molecular Biology · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The application of flow cytometry and sorting (flow cytogenetics) to plant chromosomes did not begin until the mid-1980s, having been delayed by difficulties in preparation of suspensions of intact chromosomes and discrimination of individual chromosome types. These problems have been overcome during the last ten years. So far, chromosome analysis and sorting has been reported in 17 species, including major legume and cereal crops. While chromosome classification by flow cytometry (flow karyotyping) may be used for quantitative detection of structural and numerical chromosome changes, chromosomes purified by flow sorting were found to be invaluable in a broad range of applications. These included physical mapping using PCR, high-resolution cytogenetic mapping using FISH and PRINS, production of recombinant DNA libraries, targeted isolation of markers, and protein analysis. A great potential is foreseen for the use of sorted chromosomes for construction of chromosome and chromosome-arm-specific BAC libraries, targeted isolation of low-copy (genic) sequences, high-throughput physical mapping of ESTs and other DNA sequences by hybridization to DNA arrays, and global characterization of chromosomal proteins using approaches of proteomics. This paper provides a comprehensive review of the methodology and application of flow cytogenetics, and assesses its potential for plant genome analysis.

Indexed as

Chromosomes, PlantGenome, PlantPhysical Chromosome MappingFlow CytometryKaryotypingPlantsTranslocation, Genetic

Identifiers

PMID14984104
OpenAlexW2063007477

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.