Evidence map›Paper›PMID 14982742›Full record

ArticleJournal of neurovirology2004

Host genetic polymorphisms in human immunodeficiency virus-related neurologic disease.

Ramon Diaz-Arrastia, Yunhua Gong, Cynthia J Kelly, Benjamin B Gelman

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of neurovirology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Neurocognitive Impairment and Associated Genetic Aspects in HIV Infection.Current topics in behavioral neurosciences · 2021
    Article
  3. Review
  4. Aging and Apolipoprotein E in HIV Infection.Journal of neurovirology · 2018
    Review
  5. Review
  6. Genetic, transcriptomic, and epigenetic studies of HIV-associated neurocognitive disorder.Journal of acquired immune deficiency syndromes (1999) · 2014
    Review
  7. Article
  8. Genome-wide association study of neurocognitive impairment and dementia in HIV-infected adults.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2012
    Article
  9. Article
  10. Editorial neuroAIDS review.AIDS (London, England) · 2011
    Review
  11. Article
  12. Host and viral factors influencing the pathogenesis of HIV-associated neurocognitive disorders.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2009
    Review
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ramon Diaz-ArrastiaDepartment of Neurology, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9036, USA. Ramon.diaz-Arrastia@UTSouthwestern.edu
Yunhua Gong
Cynthia J Kelly
Benjamin B Gelman
The University of Texas Southwestern Medical Center · USThe University of Texas Medical Branch at Galveston · US

Funding

TEXAS REPOSITORY FOR AIDS NEUROPATHOGENESIS RESEARCHR24NS045491 · NINDS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI GELMAN, BENJAMIN B. · 2002 to 2007
$8.1M
TEXAS REPOSITORY FOR AIDS NEUROPATHOGENESIS RESEARCHR24MH059656 · NIMH · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI GELMAN, BENJAMIN B. · 1998 to 2001
$2.7M
Hyperhomocysteinemia in Alzheimer's DiseaseR01AG017861 · NIA · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI DIAZ-ARRASTIA, RAMON R · 2001 to 2003
$1.2M
Candidate genetic polymorphisms/ HIV-associated dementiaR03MH064889 · NIMH · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI DIAZ-ARRASTIA, RAMON R · 2001 to 2002
$156k
NIAID NIH HHS U01 AI46373NIA NIH HHS R01 AG17861NIMH NIH HHS R03 MH64889NIMH NIH HHS R24 MH59656NINDS NIH HHS R24 NS45491
6 · The paper itself

Abstract

The objective of this study was to determine whether host genetic polymorphisms influence the risk of developing human immunodeficiency virus (HIV) encephalitis and vacuolar myelopathy. Allelic association studies were carried out with common polymorphisms in candidate genes that are postulated to play a role in the pathogenesis of HIV-related neurologic complications. The authors studied brains and spinal cords from 270 patients who died of acquired immunodeficiency syndrome (AIDS) from 1989 to 1996. All had complete gross and microscopic pathologic evaluations, and the presence of microglial nodules, multinucleated giant cells, myelin pallor, and vacuolar myelopathy was assessed by an experienced neuropathologist who was blinded to the genotype. DNA was extracted from frozen brain samples, and determination of the presence of the APOE4, TNF-2, IL-1B*2, ILIRN*2 polymorphisms was determined by polymerase chain reaction (PCR) and restricted fragment length polymorphism (RFLP) mapping. The authors did not detect a consistent association between inheritance of candidate polymorphic alleles and the pathologic findings of HIV encephalitis or vacuolar myelopathy. Allelic association studies with candidate genes are powerful techniques that have the potential to contribute to understanding the pathophysiology of HIV-related neurodegeneration. This preliminary study, although including a substantial number of patients, was not sufficiently powered to exclude a modest but clinically significant effects. Future studies will require much larger sample sizes and technical advances to allow screening at larger number of candidate loci.

Indexed as

Polymorphism, GeneticAIDS Dementia ComplexApolipoprotein E4Apolipoproteins ECentral Nervous SystemCohort StudiesGenetic Predisposition to DiseaseGenotypeHumansInterleukin-1Interleukin 1 Receptor Antagonist ProteinRisk FactorsSialoglycoproteinsTumor Necrosis Factor-alphaApolipoprotein E4Apolipoproteins EIL1RN protein, humanInterleukin-1Interleukin 1 Receptor Antagonist ProteinSialoglycoproteinsTNF protein, humanTumor Necrosis Factor-alpha

Identifiers

PMID14982742
OpenAlexW2084233181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.