Evidence map›Paper›PMID 14977927›Full record

ArticleInfection and immunity2004

A 38-kilobase pathogenicity island specific for Mycobacterium avium subsp. paratuberculosis encodes cell surface proteins expressed in the host.

Janin Stratmann, Birgit Strommenger, Ralph Goethe, Karen Dohmann, Gerald-F Gerlach, Karen Stevenson, Ling-Ling Li, Qing Zhang, Vivek Kapur, Tim J Bull

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification and Characterization ofJournal of bacteriology · 2021
    Article
  4. Article
  5. Proposing BCG Vaccination forMicroorganisms · 2020
    Review
  6. Elucidating the Regulon of a FurFrontiers in microbiology · 2020
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Mycobacterium avium in the postgenomic era.Clinical microbiology reviews · 2007
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Janin StratmannInstitute for Microbiology, Department of Infectious Diseases, School of Veterinary Medicine, Hannover, Germany.
Birgit Strommenger
Ralph Goethe
Karen Dohmann
Gerald-F Gerlach
Karen Stevenson
Ling-Ling Li
Qing Zhang
Vivek Kapur
Tim J Bull
University of Minnesota · USMoredun Research Institute · GBSt George's, University of London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have used representational difference analysis to identify a novel Mycobacterium avium subsp. paratuberculosis-specific ABC transporter operon (mpt), which comprises six open reading frames designated mptA to -F and is immediately preceded by two putative Fur boxes. Functional genomics revealed that the mpt operon is flanked on one end by a fep cluster encoding proteins involved in the uptake of Fe(3+) and on the other end by a sid cluster encoding non-ribosome-dependent heterocyclic siderophore synthases. Together these genes form a 38-kb M. avium subsp. paratuberculosis-specific locus flanked by an insertion sequence similar to IS1110. Expression studies using Western blot analyses showed that MptC is present in the envelope fraction of M. avium subsp. paratuberculosis. The MptD protein was shown to be surface exposed, using a specific phage (fMptD) isolated from a phage-peptide library, by differential screening of Mycobacterium smegmatis transformants. The phage fMptD-derived peptide could be used in a peptide-mediated capture PCR with milk from infected dairy herds, thereby showing surface-exposed expression of the MptD protein in the host. Together, these data suggest that the 38-kb locus constitutes an M. avium subsp. paratuberculosis pathogenicity island.

Indexed as

Amino Acid SequenceAnimalsATP-Binding Cassette TransportersBacterial ProteinsBase SequenceCattleCloning, MolecularDNA, BacterialGene ExpressionGenes, BacterialMycobacterium avium subsp. paratuberculosisOpen Reading FramesOperonParatuberculosisSequence Homology, Nucleic AcidVirulenceATP-Binding Cassette TransportersBacterial ProteinsDNA, Bacterial

Identifiers

PMID14977927
PMCPMC355995
OpenAlexW2104022204

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.