Evidence map›Paper›PMID 14966907›Full record

ArticleWorld journal of gastroenterology2004

Genes encoding Pir51, Beclin 1, RbAp48 and aldolase b are up or down-regulated in human primary hepatocellular carcinoma.

Hai Song, Shuang-Luo Xia, Cheng Liao, Yi-Liang Li, Yi-Fei Wang, Tsai-Ping Li, Mu-Jun Zhao

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. [Research Advances of RAD51AP1 in Tumor Progression and Drug Resistance].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Structure Based Design of Bicyclic Peptide Inhibitors of RbAp48.Angewandte Chemie (International ed. in English) · 2021
    Article
  12. RBBP4 promotes colon cancer malignant progressionWorld journal of gastroenterology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hai SongP.O. Box 35, State Key Laboratory of Molecular Biology, Institute of Biochemistry and Cell Biology, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences, 320 Yue-Yang Road, Shanghai 200031, China.
Shuang-Luo Xia
Cheng Liao
Yi-Liang Li
Yi-Fei Wang
Tsai-Ping Li
Mu-Jun Zhao
Center for Excellence in Molecular Cell Science · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo reveal new tumor markers and target genes from differentially expressed genes of primary tumor samples using cDNA microarray.

methodsThe (33 )P labeled cDNAs were synthesized by reverse transcription of message RNA from the liver cancerous tissue and adjacent non-cancerous liver tissue from the same patient and used to hybridize to LifeGrid 1.0 cDNA microarray blot containing 8400 known and unique human cDNA gene targets, and an expression profile of genes was produced in one paired human liver tumor tissue. After a global analysis of gene expression of 8400 genes, we selected some genes to confirm the differential expression using Northern blot and RT-PCR.

resultsParallel analysis of the hybridized signals enabled us to get an expression profile of genes in which about 500 genes were differentially expressed in the paired liver tumor tissues. We identified 4 genes, the expression of three (Beclin 1, RbAp48 and Pir51) were increased and one (aldolase b) was decreased in liver tumor tissues. In addition, the expression of these genes in 6 hepatoma cell lines was also showed by RT-PCR analysis.

conclusioncDNA microarray permits a high throughput identification of changes in gene expression. The genes encoding Beclin 1, RbAp48, Pir51 and aldolase b are first reported that may be related with hepatocarcinoma.

Indexed as

Apoptosis Regulatory ProteinsBeclin-1Carcinoma, HepatocellularCarrier ProteinsDNA-Binding ProteinsDown-RegulationFructose-Bisphosphate AldolaseGene Expression Regulation, NeoplasticHumansLiver NeoplasmsMembrane ProteinsNuclear ProteinsOligonucleotide Array Sequence AnalysisProteinsRetinoblastoma-Binding Protein 4RNA-Binding ProteinsApoptosis Regulatory ProteinsBeclin-1BECN1 protein, humanCarrier ProteinsDNA-Binding ProteinsFructose-Bisphosphate AldolaseMembrane ProteinsNuclear ProteinsProteinsRAD51AP1 protein, humanRBBP4 protein, humanRbbp4 protein, mouseRetinoblastoma-Binding Protein 4RNA-Binding Proteins

Identifiers

PMID14966907
PMCPMC4716970
OpenAlexW1537804570

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.