Evidence map›Paper›PMID 14963135›Full record

ArticleJournal of virology2004

The v3 loop is accessible on the surface of most human immunodeficiency virus type 1 primary isolates and serves as a neutralization epitope.

Miroslaw K Gorny, Kathy Revesz, Constance Williams, Barbara Volsky, Mark K Louder, Christopher A Anyangwe, Chavdar Krachmarov, Samuel C Kayman, Abraham Pinter, Arthur Nadas and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 111 citations in OpenAlex.

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  17. Structural basis of clade-specific HIV-1 neutralization by humanized anti-V3 monoclonal antibody KD-247.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2015
    Article
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Miroslaw K GornyDepartment of Pathology, New York University School of Medicine, New York, New York 10016, USA.
Kathy Revesz
Constance Williams
Barbara Volsky
Mark K Louder
Christopher A Anyangwe
Chavdar Krachmarov
Samuel C Kayman
Abraham Pinter
Arthur Nadas
Phillipe N Nyambi
John R Mascola
Susan Zolla-Pazner
VA NY Harbor Healthcare System · USNational Institutes of Health · USNew York University · USUniversity of Bamenda · CM

Funding

VIROLOGY COREP30AI027742 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GORNY, MIROSLAW K · 1989 to 2010
$19.4M
PROTECTIVE HUMAN MONOCLONAL ANTIBODIES TO HIV1R01HL059725 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZOLLA-PAZNER, SUSAN B · 1997 to 2014
$8.8M
IMMUNOLOGIC RELATEDNESS AMONG AND BETWEEN HIV-1 SUBTYPESR01AI036085 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZOLLA-PAZNER, SUSAN B · 1994 to 2008
$5.3M
EVOLUTION AND PROPERTIES OF HIV/SIV STRAINS IN CAMEROONR01AI047053 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NYAMBI, PHILLIPE N · 2000 to 2003
$2.6M
Optimizing Measurement Of Hiv-1 Neutralization Using A FZ01AI005010 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MASCOLA, JOHN R · 2002 to 2008
$538k
Preclinical Evaluation Of Neutralizing Antibodies Elicited by HIV-1 ImmunogensZ01AI005012 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MASCOLA, JOHN R · 2002 to 2008
$538k
NHLBI NIH HHS HL59725NHLBI NIH HHS R01 HL059725NIAID NIH HHS AI27742NIAID NIH HHS AI36085NIAID NIH HHS AI 47053NIAID NIH HHS P30 AI027742NIAID NIH HHS R01 AI036085NIAID NIH HHS R01 AI047053
6 · The paper itself

Abstract

Antibodies (Abs) against the V3 loop of the human immunodeficiency virus type 1 gp120 envelope glycoprotein were initially considered to mediate only type-specific neutralization of T-cell-line-adapted viruses. However, recent data show that cross-neutralizing V3 Abs also exist, and primary isolates can be efficiently neutralized with anti-V3 monoclonal Abs (MAbs). The neutralizing activities of anti-V3 polyclonal Abs and MAbs may, however, be limited due to antigenic variations of the V3 region, a lack of V3 exposure on the surface of intact virions, or Ab specificity. For clarification of this issue, a panel of 32 human anti-V3 MAbs were screened for neutralization of an SF162-pseudotyped virus in a luciferase assay. MAbs selected with a V3 fusion protein whose V3 region mimics the conformation of the native virus were significantly more potent than MAbs selected with V3 peptides. Seven MAbs were further tested for neutralizing activity against 13 clade B viruses in a single-round peripheral blood mononuclear cell assay. While there was a spectrum of virus sensitivities to the anti-V3 MAbs observed, 12 of the 13 viruses were neutralized by one or more of the anti-V3 MAbs. MAb binding to intact virions correlated significantly with binding to solubilized gp120s and with the potency of neutralization. These results demonstrate that the V3 loop is accessible on the native virus envelope, that the strength of binding of anti-V3 Abs correlates with the potency of neutralization, that V3 epitopes may be shared rather than type specific, and that Abs against the V3 loop, particularly those targeting conformational epitopes, can mediate the neutralization of primary isolates.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalAntibody AffinityEpitopesHIV-1HIV AntibodiesHIV Envelope Protein gp120HumansLinear ModelsMolecular Sequence DataNeutralization TestsSolubilityVirionAntibodies, MonoclonalEpitopesHIV AntibodiesHIV Envelope Protein gp120

Identifiers

PMID14963135
PMCPMC369230
OpenAlexW2093282128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.