Evidence map›Paper›PMID 14961073›Full record

ArticleGenes and immunity2004

Polymorphic variation in the CBLB gene in human type 1 diabetes.

R Kosoy, N Yokoi, S Seino, P Concannon

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Identification of embryonic pancreatic genes using Xenopus DNA microarrays.Developmental dynamics : an official publication of the American Association of Anatomists · 2009
    Article
  5. cblb Gene Analysis in Japanese Type 1 Diabetes with Younger Age of Onset.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2008
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

R KosoyMolecular Genetics Program, Benaroya Research Institute, Seattle, WA 98101, USA.
N Yokoi
S Seino
P Concannon
Benaroya Research InstituteChiba University · JPKobe University · JPUniversity of Washington · US

Funding

INTERDISCIPLINARY TRAINING IN GENOMIC SCIENCEST32HG000035 · NHGRI · UNIVERSITY OF WASHINGTON · PI Bruce Colston Trapnell · 1995 to 2026
$24.2M
SUSCEPTIBILITY GENES IN TYPE I DIABETESR01DK046635 · NIDDK · UNIVERSITY OF VIRGINIA · PI CONCANNON, PATRICK · 1993 to 2013
$5.4M
NHGRI NIH HHS T32 HG00035NIDDK NIH HHS DK46635
6 · The paper itself

Abstract

CBLB was evaluated as a candidate gene for type 1 diabetes (T1D) susceptibility based on its association with autoimmunity in animal models and its role in T-cell costimulatory signaling. Cblb is one of the two major diabetes predisposing loci in the Komeda diabetes-prone (KDP) rat. Cbl-b, a ubiquitin ligase, couples TCR-mediated stimulation with the requirement for CD28 costimulation, regulating T-cell activation. To identify variants with possible effects on gene function as well as haplotype tagging polymorphisms, the human CBLB coding region was sequenced in 16 individuals with T1D: no variants predicted to change the amino-acid sequence were identified. Seven single-nucleotide polymorphism (SNP) markers spanning the CBLB gene were genotyped in multiplex T1D families and assessed for disease association by transmission disequilibrium testing. No significant evidence of association was obtained for either individual markers or marker haplotypes.

Indexed as

Adaptor Proteins, Signal TransducingGenetic VariationPolymorphism, Single NucleotideAdultDiabetes Mellitus, Type 1FemaleGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLinkage DisequilibriumMaleNuclear FamilyPolymerase Chain ReactionProto-Oncogene Proteins c-cblUbiquitin-Protein LigasesAdaptor Proteins, Signal TransducingCBLB protein, humanCblb protein, ratProto-Oncogene Proteins c-cblUbiquitin-Protein Ligases

Identifiers

PMID14961073
OpenAlexW2055398139

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.