Evidence map›Paper›PMID 14762173›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2004

Modification of Helicobacter pylori outer membrane protein expression during experimental infection of rhesus macaques.

Jay V Solnick, Lori M Hansen, Nina R Salama, Jenni K Boonjakuakul, Michael Syvanen

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 115 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed, 1 pooled it
18.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 1 synthesis or guideline pooled it, 247 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. The immunoregulatory role of helper T cells inFrontiers in immunology · 2025
    Review
  6. Pathogens (Basel, Switzerland) · 2024
    Review
  7. Article
  8. Expression Assessment of theInternational journal of molecular and cellular medicine · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Frontiers in immunology · 2022
    Review
  13. Enhanced Fitness of a Helicobacter pyloriInfection and immunity · 2021
    Article
  14. Toxins · 2021
    Review
  15. Article
  16. mBio · 2020
    Article
  17. Article
  18. Prevalence of theThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2020
    Article
  19. Toxins · 2019
    Review
  20. Article

55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jay V SolnickDepartments of Medicine and Medical Microbiology and Immunology, and Center for Comparative Medicine, University of California, Davis, CA 95616.
Lori M Hansen
Nina R Salama
Jenni K Boonjakuakul
Michael Syvanen
University of California, Davis · USFred Hutch Cancer Center · US

Funding

GENETIC REQUIREMENTS OF HELICOBACTER PYLORI INFECTIONR01AI054423 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Nina Salama · 2004 to 2026
$9.5M
INTESTINAL CYTOKINE &TCELL HOMEOSTASIS IN SIV INFECTIONR01AI043274 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI DANDEKAR, SATYA · 1998 to 2013
$5.1M
Gene expression during H. pylori-host interactionsR01AI042081 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI SOLNICK, JAY V. · 1998 to 2007
$2.5M
Transmission of H. pylori infection in the rhesus monkeyR01RR014298 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI SOLNICK, JAY V. · 2001 to 2005
$1.8M
NCRR NIH HHS R01 RR014298NCRR NIH HHS RR14298NIAID NIH HHS AI42081NIAID NIH HHS AI43274NIAID NIH HHS R01 AI042081NIAID NIH HHS R01 AI043274
6 · The paper itself

Abstract

Clinical isolates of Helicobacter pylori show marked diversity, which may derive from genomic changes that occur during the often lifelong association of the bacterium with its human host. We used the rhesus macaque model, together with DNA microarrays, to examine genomic changes in H. pylori that occur early during experimental infection. Microarray analysis showed that H. pylori recovered from challenged macaques had deleted babA, a member of a large family of paralogous outer membrane proteins (OMPs) that mediates attachment of H. pylori to the Lewis B blood group antigen on gastric epithelium. In some cases the babA gene was replaced by babB, an uncharacterized OMP that is closely related to babA. In other cases the babA gene was present but was not expressed because of alteration in dinucleotide CT repeats in the 5' coding region. In either case, strains lacking babA did not adhere to Lewis B, which is expressed on macaque gastric epithelium. Absence of babA and duplication of babB was also seen in H. pylori isolates derived from human clinical samples, suggesting that this gene conversion event is not unique to experimentally infected rhesus monkeys. These results demonstrate in real time with a relevant animal model that H. pylori regulates OMP expression in vivo by using both antigenic variation and phase variation. We suggest that changes in babA and babB after experimental infection of macaques represent a dynamic response in the H. pylori outer membrane that facilitates adherence to the gastric epithelium and promotes chronic infection.

Indexed as

Gene Expression Regulation, ViralAdhesins, BacterialAnimalsBacterial AdhesionBacterial Outer Membrane ProteinsBiopsyBlotting, SouthernCarrier ProteinsGastric MucosaGene Expression ProfilingHelicobacter InfectionsHelicobacter pyloriHumansImmunohistochemistryMacaca mulattaMolecular Sequence DataAdhesins, BacterialBabA protein, Helicobacter pyloriBabB protein, Helicobacter pyloriBacterial Outer Membrane ProteinsCarrier ProteinsRNA, MessengerRNA, Viral

Identifiers

PMID14762173
PMCPMC357059
OpenAlexW2087530874

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.